RunpengLuo

RunpengLuo's Stars

• labuladong/fucking-algorithm

  刷算法全靠套路，认准 labuladong 就够了！English version supported! Crack LeetCode, not only how, but also why.

  Language:Markdown125k2.3k83223.2k

• alshedivat/al-folio

  A beautiful, simple, clean, and responsive Jekyll theme for academics

  Language:HTML10.6k2454810.9k

• EmbarkStudios/rust-gpu

  🐉 Making Rust a first-class language and ecosystem for GPU shaders 🚧

  Language:Rust7.3k95408246

• Rust-GPU/Rust-CUDA

  Ecosystem of libraries and tools for writing and executing fast GPU code fully in Rust.

  Language:Rust3.1k4775118

• pyqt/examples

  Learn to create a desktop app with Python and Qt

  Language:Python2.3k7811572

• marbl/CHM13

  The complete sequence of a human genome

  905689499

• cogciprocate/ocl

  OpenCL for Rust

  Language:Rust7231614475

• marbl/canu

  A single molecule sequence assembler for genomes large and small.

  Language:C++654542.3k179

• weizhongli/cdhit

  Automatically exported from code.google.com/p/cdhit

  Language:Perl63428133128

• nicgirault/circosJS

  d3 library to build circular graphs

  Language:JavaScript5062874118

• ComparativeGenomicsToolkit/cactus

  Official home of genome aligner based upon notion of Cactus graphs

  Language:C50321838110

• wdecoster/NanoPlot

  Plotting scripts for long read sequencing data

  Language:Python4131233747

• lh3/minigraph

  Sequence-to-graph mapper and graph generator

  Language:C4052910941

• ponnhide/pyCircos

  python Circos

  Language:Python334112366

• jhpoelen/zenodo-upload

  upload big files to Zenodo using cURL, jq and bash

  Language:Shell21841136

• rrwick/Badread

  a long read simulator that can imitate many types of read problems

  Language:Python16743322

• ksahlin/strobealign

  Aligns short reads using dynamic seed size with strobemers

  Language:C++1411017017

• ksahlin/strobemers

  A repository for generating strobemers and evalaution

  Language:C++7541012

• ljdursi/poapy

  A simple Partial Order Aligner based on Lee, Grasso and Sharlow (2002), for education/demonstration purposes

  Language:Python718612

• comprna/RATTLE

  Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

  Language:C++5695410

• katerinakazantseva/strainy

  Graph-based assembly phasing

  Language:Python425284

• rob-p/FQFeeder

  Self-contained, multi-threaded fasta/q parser

  Language:C++42627

• luizirber/nthash

  ntHash implementation in Rust

  Language:Rust34627

• schmeing/gapless

  Gapless provides combined scaffolding, gap-closing and assembly correction with long reads

  Language:Python304

• CompBio-PhD-cn/handbook

  This is a project aims to help Chinese student apply compbio PhD program

  Language:HTML23105

• epi2me-labs/wf-amplicon

  Language:Nextflow194225

• karel-brinda/NanoSim-H

  NanoSim-H: a simulator of Oxford Nanopore reads; a fork of NanoSim.

  Language:Python173136

• linguoliang/puzzle-hi-c

  Language:Python12471

• jnovembre/ENCprime

  ENCprime : Command-line utility for measuring codon bias

  Language:C9144

• Bohdan-Khomtchouk/codon-usage

  Machine learning scripts/analyses to accompany manuscript entitled "Codon usage bias levels predict taxonomic identity and genetic composition" (for code re-use/reproducibility purposes)

  Language:Jupyter Notebook4302