Sage-Bionetworks/schematic

Issues

• In JIRA: Investigate `Test Schematic` workflow runtime

  #1141 opened 9 months ago by GiaJordan
  4

• Add a suggested replacement in validation

  #1258 opened a year ago by allaway
  4

• Docker container error

  #1140 opened 2 years ago by GiaJordan
  2

• In Jira: Update TableOperations Tests to Run on Remote

  #1122 opened 2 years ago by GiaJordan
  1

• In Jira: Table Upsert - Add support for other login credential locations

  #1157 opened 2 years ago by GiaJordan
  1

• In Jira: Table upsert - default primary key

  #1159 opened 2 years ago by GiaJordan
  1

• Numbers in the annotation key field in Synapse.org prevents google sheet manifest from being created in DCA

  #1194 opened 2 years ago by cconrad8
  1

• manifest/download reorders columns

  #1199 opened a year ago by afwillia
  0

• In JIRA: Table upsert - updating existing rows

  #1160 opened 2 years ago by GiaJordan
  2

• In JIRA: Table Upsert - custom primary keys

  #1158 opened 2 years ago by GiaJordan
  6

• In JIRA: TT1 UWSGI responded with `OSError: write error` when I tested it with `manifest/generate` endpoint

  #1163 opened 2 years ago by MiekoHash
  1

• In JIRA: TT1 Review the url format of the REST API endpoints

  #1150 opened 2 years ago by MiekoHash
  0

• TT1 Enhance schematic REST API security by avoiding unlimited Cross-Origin Resource Sharing (CORS)

  #1149 opened 2 years ago by MiekoHash
  0

• schematic: investigate GE latencies and error parsing

  #1173 opened 2 years ago by milen-sage
  5

• In JIRA: Endpoint that returns attributes of a given data model component

  #1174 opened 2 years ago by lakikowolfe
  3

• Onboarding to Bridge2AI Project: Communication & Training

  #1154 opened 2 years ago by MiekoHash
  2

• In JIRA: Lightly refactor schematic synapse storage to reduce querying file view or stop downloading fileview as a CSV

  #1187 opened 2 years ago by linglp
  4

• Logging level does not propagate between modules

  #1179 opened 2 years ago by GiaJordan
  0

• Investigate upsert submission failure on develop-add-csv-only-manifest-submit branch

  #1185 opened 2 years ago by mialy-defelice
  0

• Rename Bulk WES -> Bulk DNA-Seq

  #1182 opened 2 years ago by inodb
  0

• Key error when regex validation rule in Filename attribute

  #1156 opened 2 years ago by adamjtaylor
  3

• Investigate why `great_expectation.yml` gets changed

  #1176 opened 2 years ago by linglp
  0

• TT1 Doc: Consolidate Data Development Workflow and Versioning

  #1127 opened 2 years ago by MiekoHash
  4

• TT1 Research asynchronous API function calls in Schematic for Synapse manifest submission

  #1120 opened 2 years ago by MiekoHash
  2

• Allow schema labels to be the same as display names

  #1112 opened 2 years ago by andrewelamb
  3

• schematic: allow using labels as column headers in templates instead of display names

  #1123 opened 2 years ago by milen-sage
  9

• HTAN SD: Missing BU demographics records

  #1165 opened 2 years ago by MiekoHash
  1

• TT1 Got an error when trying to submit HTAN manifest to my test project

  #1170 opened 2 years ago by MiekoHash
  0

• TT1 Investigate generating a manifest: /manifest/generate

  #1162 opened 2 years ago by MiekoHash
  0

• TT1 Investigate submitting manifest: /model/submit

  #1152 opened 2 years ago by MiekoHash
  0

• TT1 Investigate validating manifest: /model/validate

  #1151 opened 2 years ago by MiekoHash
  0

• Manifest submission, allow csv upload only option

  #1172 opened 2 years ago by mialy-defelice
  0

• Tests in develop branch are failing: errors rendered by Great Expectation

  #1169 opened 2 years ago by linglp
  2

• Errors submitting manifest

  #1119 opened 2 years ago by andrewelamb
  5

• Allow camelCase column headers to be submitted to Synapse

  #1167 opened 2 years ago by lopierra
  0

• HSD: Reproduce "after validating the spreadsheet submitting biospecimen metadata sheet hangs and never completes"

  #1137 opened 2 years ago by MiekoHash
  2

• Column headers are missing when using `manifest/generate` endpoint to return an existing manifest

  #1148 opened 2 years ago by linglp
  3

• TT1 Stress test and troubleshoot uwsgi local and on AWS

  #1121 opened 2 years ago by MiekoHash
  1

• Schematic Asset store refactor - context abstraction

  #1147 opened 2 years ago by GiaJordan
  0

• Add endpoint to get schema names from a data model

  #1153 opened 2 years ago by afwillia
  0

• Schematic asset store refactor - fs operations needed

  #1146 opened 2 years ago by GiaJordan
  0

• Error validating manifest

  #1118 opened 2 years ago by andrewelamb
  8

• Data Modeling Group Presentation

  #1138 opened 2 years ago by GiaJordan
  0

• `gx_exceptions.CheckpointError` occurred when validating a manifest

  #1135 opened 2 years ago by linglp
  0

• max and min validation rules

  #1132 opened 2 years ago by andrewelamb
  0

• Add `use_schema_label` as a parameter for `model/submit` endpoint

  #1116 opened 2 years ago by linglp
  0

• Unable to use schematic when updating packages to current lock file

  #1117 opened 2 years ago by andrewelamb
  0

• Pandas 1.5.3 broke read_json function in `/model/validate` endpoint

  #1114 opened 2 years ago by linglp
  1

• Schematic Schema Refactor: JsonSchema

  #1113 opened 2 years ago by mialy-defelice
  0

• Schematic Schema Refactor: DataModelJsonLD

  #1111 opened 2 years ago by mialy-defelice
  0