abremges

abremges's Stars

• chrislgarry/Apollo-11

  Original Apollo 11 Guidance Computer (AGC) source code for the command and lunar modules.

  Language:Assembly57.3k1.3k3806.9k

• koalaman/shellcheck

  ShellCheck, a static analysis tool for shell scripts

  Language:Haskell35.7k4172.6k1.7k

• danielecook/Awesome-Bioinformatics

  A curated list of awesome Bioinformatics libraries and software.

  3k16910585

• joshnewlan/say_what

  Using speech-to-text to fully check out during con calls

  Language:Python2.1k742123

• soedinglab/MMseqs2

  MMseqs2: ultra fast and sensitive search and clustering suite

  Language:C1.3k32805185

• Blosc/c-blosc

  A blocking, shuffling and loss-less compression library that can be faster than `memcpy()`.

  Language:C97749154156

• imbs-hl/ranger

  A Fast Implementation of Random Forests

  Language:C++76842424191

• ablab/spades

  SPAdes Genome Assembler

  Language:C++721321.1k132

• attractivechaos/kann

  A lightweight C library for artificial neural networks

  Language:C6744838116

• hyattpd/Prodigal

  Prodigal Gene Prediction Software

  Language:C426269785

• thomasp85/scico

  Palettes for R based on the Scientific Colour-Maps

  Language:R40781423

• marbl/Mash

  Fast genome and metagenome distance estimation using MinHash

  Language:C++3813316591

• rrwick/Filtlong

  quality filtering tool for long reads

  Language:C++273143725

• MrOlm/drep

  Rapid comparison and dereplication of genomes

  Language:Python242822035

• ryanlayer/giggle

  Interval data structure

  Language:C220205429

• fastqe/fastqe

  FASTQ sequence quality visualisation with Emoji

  Language:Python15462215

• thomasp85/densityClust

  Clustering by fast search and find of density peaks

  Language:R150201066

• cmks/DAS_Tool

  DAS Tool

  Language:R13599617

• CRG-CNAG/CalliNGS-NF

  GATK RNA-Seq Variant Calling in Nextflow

  Language:Nextflow13192653

• xavierdidelot/ClonalFrameML

  ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes

  Language:C++1041015026

• thackl/minidot

  Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2

  Language:R725810

• dnbaker/bonsai

  Bonsai: Fast, flexible taxonomic analysis and classification

  Language:C++709411

• sahirbhatnagar/manhattanly

  Language:R6051717

• ToniWestbrook/paladin

  Protein Alignment and Detection Interface

  Language:C5811417

• mw55309/Kraken_db_install_scripts

  Updated Kraken DB install scripts to cope with new-ish NCBI structure

  Language:Perl469725

• mikabr/ggpirate

  pirate plots for ggplot2

  Language:R26098

• CK7/abawaca

  abawaca is a binning program for metagenomics

  Language:C++13772

• lh3/bhtsne

  Barnes-Hut t-SNE

  Language:C++51

• AlphaSquad/Binning_evaluation

  10

• CAMI-challenge/CAMISIM-DATA

  Supplementary data for CAMISIM

  150