amyxlu

amyxlu's Stars

• karpathy/nanoGPT

  The simplest, fastest repository for training/finetuning medium-sized GPTs.

  Language:Python36.5k3713155.7k

• microsoft/unilm

  Large-scale Self-supervised Pre-training Across Tasks, Languages, and Modalities

  Language:Python19.6k3021.4k2.5k

• lucidrains/imagen-pytorch

  Implementation of Imagen, Google's Text-to-Image Neural Network, in Pytorch

  Language:Python8k114300760

• facebookresearch/DiT

  Official PyTorch Implementation of "Scalable Diffusion Models with Transformers"

  Language:Python6.1k4580539

• facebookresearch/deit

  Official DeiT repository

  Language:Python4k48197553

• lucidrains/vector-quantize-pytorch

  Vector (and Scalar) Quantization, in Pytorch

  Language:Python2.5k30120197

• crowsonkb/k-diffusion

  Karras et al. (2022) diffusion models for PyTorch

  Language:Python2.3k4265374

• webdataset/webdataset

  A high-performance Python-based I/O system for large (and small) deep learning problems, with strong support for PyTorch.

  Language:Python2.2k22324177

• facebookresearch/fvcore

  Collection of common code that's shared among different research projects in FAIR computer vision team.

  Language:Python2k4079226

• LuChengTHU/dpm-solver

  Official code for "DPM-Solver: A Fast ODE Solver for Diffusion Probabilistic Model Sampling in Around 10 Steps" (Neurips 2022 Oral)

  Language:Python1.5k2052120

• facebookincubator/submitit

  Python 3.8+ toolbox for submitting jobs to Slurm

  Language:Python1.3k24118120

• dit/dit

  Python package for information theory.

  Language:Python5082510288

• NVlabs/edm2

  Analyzing and Improving the Training Dynamics of Diffusion Models (EDM2)

  Language:Python48912519

• SHI-Labs/NATTEN

  Neighborhood Attention Extension. Bringing attention to a neighborhood near you!

  Language:Cuda3471010927

• tttianhao/CLEAN

  CLEAN: a contrastive learning model for high-quality functional prediction of proteins

  Language:Python22274541

• maabuu/posebusters

  Plausibility checks for generated molecule poses.

  Language:Python21531913

• a-r-j/ProteinWorkshop

  Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)

  Language:Python19462016

• BioinfoMachineLearning/bio-diffusion

  A geometry-complete diffusion generative model (GCDM) for 3D molecule generation and optimization (Nature CommsChem)

  Language:Python1694924

• ProteinDesignLab/protpardelle

  Diffusion-based all-atom protein generative model.

  Language:Python1545813

• openmm/spice-dataset

  A collection of QM data for training potential functions

  Language:Python14716649

• pomonam/kronfluence

  Influence Functions with (Eigenvalue-corrected) Kronecker-Factored Approximate Curvature

  Language:Python94687

• THUNLP-MT/dyMEAN

  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"

  Language:Python926248

• gcorso/particle-guidance

  Implementation of Particle Guidance: non-I.I.D. Diverse Sampling with Diffusion Models

  Language:Python65212

• cloneofsimo/karras-power-ema-tutorial

  Language:Python49201

• ianli/elbowpatched-boilerplate

  Create an academic personal website on Jekyll and GitHub Pages

  Language:CSS351013

• PDBeurope/pdb-images

  Generates images from mmCIF/BCIF files

  Language:TypeScript33604

• BernhoferM/TMbed

  Transmembrane proteins predicted through Language Model embeddings

  Language:Python26183

• Zehui127/1d-swin

  The implementation of 1d-swin, an efficient transformer for capturing hierarchical 1-dimentional long range sequence

  Language:Python17434

• Genentech/beignet

  A standard library for biological research.

  Language:Python157135

• SimonKitSangChu/EsmTherm

  Language:Python9122