bcgsc/arks

Issues

• add option to output ABySS-friendly graphviz

  #2 opened 5 years ago by benvvalk
  1

• calcBarcodeMultiplicities.pl cannot handle uncompressed fastq as input

  #1 opened 5 years ago by benvvalk
  1

• No scaffolding with arks-links

  #23 opened 5 years ago by rimjhimroy
  4

• Questions about using multiple libraries

  #24 opened 5 years ago by kazuaki0816
  4

• Perl library error

  #25 opened 5 years ago by apn83
  2

• Segmentation fault

  #26 opened 5 years ago by shameem356
  6

• no changes after scaffolding with arks-tigmint-links pipeline

  #22 opened 5 years ago by YiweiNiu
  9

• Minimum coverage requirements for ARKS?

  #20 opened 5 years ago by lindseyperrin
  2

• Scaffolds with a single ambiguous (N) base

  #21 opened 5 years ago by bbrunet
  3

• original.gv is only 12 byte and scaffolds_imap.tsv is 0 byte

  #18 opened 5 years ago by ZuyaoLiu
  3

• Unable to get the correct output running the ARKS demo

  #19 opened 5 years ago by lindseyperrin
  3

• arks on bioconda?

  #13 opened 6 years ago by nick-youngblut
  2

• Arks.h:30:35: fatal error: /google/sparse_hash_map: No such file or directory

  #9 opened 6 years ago by yangwu91
  6

• barcodes not in the barcode multiplicity file?

  #17 opened 6 years ago by Asutu
  3

• Running arks / arcs / tigmint with multiple 10X libraries

  #16 opened 6 years ago by iwohlers
  2

• arks-make error : no rule to make target

  #15 opened 6 years ago by lebarsarthur
  3

• Uncertain about how to get BX tag from longranger

  #14 opened 6 years ago by zrlewis
  3

• calcBarcodeMultiplicities.pl error

  #12 opened 6 years ago by arunprasanna83
  3

• bwa bam files under /tmp ?

  #10 opened 6 years ago by marchoeppner
  2

• Error running demo of Arks

  #11 opened 6 years ago by arunprasanna83
  8

• Question about interleaved input

  #7 opened 6 years ago by marchoeppner
  6

• Identical read headers in demo datat

  #8 opened 6 years ago by kfletcher88
  2

• There is an arcs_test-demo for arks, but isn't an arks_test-demo needed for arks?

  #6 opened 6 years ago by ckeeling
  2

• Small ARKS bugs

  #3 opened 7 years ago by lcoombe
  1

• Should I use ARC or ARK

  #4 opened 7 years ago by billzt
  2