ben-laufer/DMRichR

Issues

• Error in processing Bismark cytosine reports

  #87 opened 3 months ago by MinS1
  1

• Error in `map()`

  #86 opened 3 months ago by mukhtarsadykov
  0

• Machine learning logical input error

  #85 opened 4 months ago by QvickA
  0

• processBismark Error

  #84 opened 7 months ago by Blondeau-Bidet
  0

• next step after add a custom genome

  #83 opened 7 months ago by Blondeau-Bidet
  1

• An error showed "'error in evaluating the argument 'x' in selecting a method for function 'as.data.frame': 'mc.cores' > 1 is not supported on Windows"

  #82 opened a year ago by thsign7788
  2

• Error during the adjustment covariate

  #81 opened a year ago by mukhtarsadykov
  0

• DMRichR::annotationDatabases()

  #77 opened a year ago by bazyliszek
  2

• MethylDackel implementation

  #78 opened a year ago by bazyliszek
  2

• Confused about DMR annotation

  #80 opened a year ago by f6v
  1

• Can I use this package for RRBS data & issue with running DMRichR::DM.R

  #76 opened a year ago by MiaSands
  2

• Using newer Ontology for enrichR

  #75 opened a year ago by dlabuz
  1

• Error in CMplot: :CMplot

  #72 opened a year ago by f6v
  1

• sampleNames(bs) == as.character(meta$Name) are not all TRUE

  #73 opened a year ago by dlabuz
  1

• How do I point to files?

  #71 opened a year ago by f6v
  2

• Installation compatibility issues with BioCManager and r@4.1.x

  #70 opened a year ago by perrymil
  4

• Cannot install this package "ben-laufer / DMRichR" with error information

  #69 opened 2 years ago by DengEr-1993
  3

• Large candidate regions with more than 1000 CpGs detected

  #68 opened 2 years ago by semenko
  1

• help for DMRrichR

  #67 opened 2 years ago by hmyh1202
  1

• For the coverage?

  #65 opened 2 years ago by hmyh1202
  2

• style specified by 'UCSC' error

  #64 opened 2 years ago by farmohh
  2

• cavPor genome

  #63 opened 2 years ago by farmohh
  2

• error Block analysis has produced an error

  #62 opened 2 years ago by sashulkaSh
  3

• Error with read.bismark ?

  #61 opened 2 years ago by Peter-Berube
  1

• Error in enrichment testing

  #58 opened 3 years ago by wb-yun
  4

• ensembldb option

  #54 opened 3 years ago by ben-laufer
  0

• Error in h(simpleError(msg, call)) : error in evaluating the argument 'args' in selecting a method for function 'do.call': GRanges objects don't support [[, as.list(), lapply(), or unlist() at the moment

  #57 opened 3 years ago by wb-yun
  6

• Error selecting significant DMRs: "Error in beta/pi : non-numeric argument to binary operator"

  #56 opened 3 years ago by semenko
  4

• Error in createCommonDmrsHeatmap / hclust

  #48 opened 4 years ago by semenko
  7

• Option to not run DMRichR::GOfuncR() in DM.R

  #45 opened 4 years ago by ben-laufer
  1

• REVIGO website update creating errors for DMRichR::REVIGO() and DMRichR::GOplot()

  #44 opened 4 years ago by ben-laufer
  1

• Custom genomes

  #37 opened 4 years ago by ben-laufer
  2

• Install R package issue

  #36 opened 4 years ago by El-Castor
  10

• Problem in testing for blocks of differential methylation

  #34 opened 5 years ago by StefaniaTuveri
  2

• can this program be used for genome hg19？

  #32 opened 5 years ago by cby01
  2

• Parsing files and constructing valid loci

  #30 opened 5 years ago by bazyliszek
  5

• Error in processBismark call to read.bismark

  #1 opened 6 years ago by cemordaunt
  1