cemordaunt
Computational Biologist at GSK. Interested in target identification, epigenomics, and bioinformatics.
GSKPhiladelphia, PA
Pinned Repositories
DMRichR
A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
AutismCordBloodExpression
Analysis of gene expression in umbilical cord blood from ASD, Non-TD, and TD subjects in the MARBLES and EARLI studies
AutismCordBloodMethylation
Analysis of DNA methylation data by whole-genome bisulfite sequencing in umbilical cord blood from ASD and TD subjects in the MARBLES and EARLI studies
comethyl
An R package for weighted region comethylation network analysis
CpG_Me
A whole-genome bisulfite sequencing (WGBS) pipeline for the analysis and QC of DNA methylation that goes from from raw reads to a CpG count matrix
DMRfinder
A pipeline to identify differentially-methylated regions from whole-genome bisulfite sequencing data
DMRichR
A workflow for the statistical analysis and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
WilsonDiseaseEpigenome
Analysis scripts for identification and visualization of Wilson disease-associated DNA methylation changes in human liver and blood
WilsonDiseaseThioredoxin
Analysis of DNA methylation and gene expression for thioredoxin system genes in Wilson disease
cemordaunt's Repositories
cemordaunt/comethyl
An R package for weighted region comethylation network analysis
cemordaunt/DMRfinder
A pipeline to identify differentially-methylated regions from whole-genome bisulfite sequencing data
cemordaunt/WilsonDiseaseEpigenome
Analysis scripts for identification and visualization of Wilson disease-associated DNA methylation changes in human liver and blood
cemordaunt/AutismCordBloodExpression
Analysis of gene expression in umbilical cord blood from ASD, Non-TD, and TD subjects in the MARBLES and EARLI studies
cemordaunt/AutismCordBloodMethylation
Analysis of DNA methylation data by whole-genome bisulfite sequencing in umbilical cord blood from ASD and TD subjects in the MARBLES and EARLI studies
cemordaunt/CpG_Me
A whole-genome bisulfite sequencing (WGBS) pipeline for the analysis and QC of DNA methylation that goes from from raw reads to a CpG count matrix
cemordaunt/DMRichR
A workflow for the statistical analysis and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
cemordaunt/WilsonDiseaseThioredoxin
Analysis of DNA methylation and gene expression for thioredoxin system genes in Wilson disease