bunop

bunop's Stars

• vinta/awesome-python

  An opinionated list of awesome Python frameworks, libraries, software and resources.

  Language:Python228k6.1k025k

• ossu/computer-science

  🎓 Path to a free self-taught education in Computer Science!

  173k5.8k64521.9k

• anuraghazra/github-readme-stats

  :zap: Dynamically generated stats for your github readmes

  Language:JavaScript70.4k2771.3k23.4k

• Developer-Y/cs-video-courses

  List of Computer Science courses with video lectures.

  67.6k1.9k1439.2k

• google-research/tuning_playbook

  A playbook for systematically maximizing the performance of deep learning models.

  27.6k291432.3k

• abraunegg/onedrive

  OneDrive Client for Linux

  Language:D10.3k1101.2k870

• nextflow-io/nextflow

  A DSL for data-driven computational pipelines

  Language:Groovy2.8k893.4k642

• pachterlab/gget

  🧬 gget enables efficient querying of genomic reference databases

  Language:Python959107175

• gimseng/99-ML-Learning-Projects

  A list of 99 machine learning projects for anyone interested to learn from coding and building projects

  Language:Jupyter Notebook7162899193

• r-lib/rig

  The R Installation Manager

  Language:Rust6811021122

• Gaius-Augustus/BRAKER

  BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

  Language:Perl3732382882

• Gaius-Augustus/Augustus

  Genome annotation with AUGUSTUS

  Language:C++29118282111

• abidlabs/deep-learning-genomics-primer

  Contains files for the deep learning in genomics primer.

  Language:Jupyter Notebook2618464

• PASApipeline/PASApipeline

  PASA software

  Language:Perl1781330857

• EVidenceModeler/EVidenceModeler

  source code for EVM

  Language:Perl10549821

• ogotoh/spaln

  Genome mapping and spliced alignment of cDNA or amino acid sequences

  Language:C++9837216

• b-rodrigues/rap4all

  Language:HTML9652430

• IARCbioinfo/BAM-tricks

  Tip and tricks for BAM files

  849010

• gitonthescene/csv-reconcile

  A reconciliation service for OpenRefine serving data from a given CSV file.

  Language:Python725238

• genepi/nf-gwas

  A nextflow pipeline to perform state-of-the-art genome-wide association studies.

  Language:Nextflow6473422

• NBISweden/pipelines-nextflow

  A set of workflows written in Nextflow for Genome Annotation.

  Language:Nextflow44375918

• Arcadia-Science/metagenomics

  A Nextflow workflow for QC, evaluation, and profiling of metagenomic samples using short- and long-read technologies

  Language:Nextflow377383

• wlandau/targets-four-minutes

  Get started with the {targets} R package in four minutes

  Language:R363012

• Chim-SO/cookiecutter-mlops

  A logical, reasonably standardized, but flexible project structure for MLops.

  Language:Makefile30007

• enormandeau/snplift

  Transfer coordinates across genomes

  Language:Python23271

• avaughn271/AdmixtureBayes

  Language:Python18131

• kausmees/GenoCAE

  Convolutional autoencoder for genotype data

  Language:Python1532810

• nf-core/setup-nextflow

  A GitHub action to install Nextflow

  Language:TypeScript12151165

• EBIvariation/variant-remapping

  The pipeline for remapping VCF variants between two arbitrary FASTA assemblies.

  Language:Python54117

• nf-core/rangeland

  Pipeline for remotely sensed imagery. The pipeline processes satellite imagery alongside auxiliary data in multiple steps to arrive at a set of trend files related to land-cover changes.

  Language:Nextflow517413