compomics/ThermoRawFileParser

Issues

• ETciD and EThcD annotation

  #182 opened 6 months ago by rolivella
  3

• Orbitrap recognized in `referenceableParamGroupList` but not in `instrumentConfigurationList` ?

  #177 opened 7 months ago by elliotfontaine
  1

• Wrong annotation for EThCD and ETciD with last Tune v4.0

  #175 opened 7 months ago by rolivella
  13

• Prefilter spectra for MS-level filtering

  #176 opened 7 months ago by caetera
  0

• TRFP still fails for symlinked input

  #180 opened 8 months ago by bernt-matthias
  6

• How to compile in Mono?

  #174 opened a year ago by phlaaj
  2

• Instrument Serial Number is the same across instruments in metadata

  #173 opened a year ago by kostrouc
  0

• Exclude Exception Data

  #171 opened a year ago by corinnabrungs
  3

• Export Instrument Method name in Metadata output

  #172 opened a year ago by baezaj
  4

• Error attempting to parse Chromoleon7 raw files

  #160 opened 2 years ago by hnnsmchls
  6

• No dissociation method detected

  #159 opened a year ago by ypriverol
  2

• Docker Image build for linux/amd64 and linux/arm64/v8

  #151 opened a year ago by gimse
  3

• Extracting from specific scan filters

  #158 opened a year ago by micro128
  2

• Missing isolation width offsets for SPS masses

  #162 opened a year ago by radusuciu
  8

• Conversion fails for PRM files

  #163 opened a year ago by lazear
  7

• [question] astral support

  #167 opened a year ago by timosachsenberg
  9

• Issue reading my file

  #169 opened a year ago by agboken
  2

• Error with 1.4.2

  #165 opened a year ago by glnegri
  4

• mzML intensity unit confusion

  #156 opened 2 years ago by martinPasen
  4

• [Exploris] Issue with EASY-IC lockmass calibration/filtering

  #153 opened 2 years ago by lfnothias
  2

• Isolation window changes?

  #152 opened 2 years ago by edeutsch
  5

• Processing of "symlinked" files

  #146 opened 2 years ago by caetera
  2

• Conversion of RAW file to mzML fails when "Failed to get reaction when parsing precursor"

  #147 opened 2 years ago by mroemer
  20

• Gzip flag overrides output file flag

  #148 opened 2 years ago by lazear
  7

• Is it possible to extract pressure profiles as csv file in batch?

  #133 opened 3 years ago by AnStaes
  8

• v1.4.1 docker image

  #145 opened 2 years ago by wholtz
  3

• Silently failing on some raw files

  #144 opened 2 years ago by wsnoble
  7

• Need to read deconvoluted RAW built by FreeStyle

  #141 opened 2 years ago by dtabb73
  11

• Exit code of 0 on conversion failure

  #140 opened 2 years ago by wholtz
  2

• Error opening (ThermoFisher.CommonCore.RawFileReader.Facade.RawFileLoader)

  #143 opened 2 years ago by wholtz
  1

• Conversion to support complex filter expressions?

  #142 opened 2 years ago by keesh-elucid
  3

• Wrong assignment of MS3 to MS2

  #139 opened 2 years ago by MatthewThe
  3

• Exception during conversion

  #126 opened 2 years ago by tomas-pluskal
  10

• Precursor intensity (the final issue)

  #125 opened 2 years ago by caetera
  7

• -s parameter fails to convert scan data

  #118 opened 3 years ago by tomas-pluskal
  5

• Build on Debian 11 fails

  #138 opened 3 years ago by starling13
  2

• RawFileReader .NET assembly page offline

  #124 opened 3 years ago by tobiasko
  4

• Is possible to extract PDA and MS data from mzml files to csv?

  #134 opened 3 years ago by ZewSam
  5

• Extracting Signal to Noise data from Raw Files

  #130 opened 3 years ago by GeorgWa
  17

• average and centroid

  #135 opened 3 years ago by rmflight
  2

• CPUs Parlallelization available?

  #132 opened 3 years ago by rolivella
  2

• Parsing mzML with xmllint

  #131 opened 3 years ago by rolivella
  8

• The given key 'PaperSprayIonization' was not present in the dictionary

  #128 opened 3 years ago by abdelq
  2

• missing peaks after conversion

  #127 opened 3 years ago by Seb-Leb
  2

• MacOS solution

  #123 opened 3 years ago by Ni-Ar
  2

• Semantic arguments for formats

  #121 opened 3 years ago by sorenwacker
  2

• MZ Values not sorted after conversion and peak picking

  #117 opened 3 years ago by SteffenHeu
  7

• MS1 spectra are not centroided in mzML output, but marked as such

  #122 opened 3 years ago by levitsky
  1

• Wrong Orbitrap Exploris 480 CV?

  #120 opened 3 years ago by rolivella
  3

• spammy output

  #119 opened 4 years ago by jcanderan
  1