dombraccia
Ph.D. Computational Biology, Bioinformatics & Genomics.
C M Cherry ConsultingPhiladelphia, PA
dombraccia's Stars
PySimpleGUI/PySimpleGUI
Python GUIs for Humans! PySimpleGUI is the top-rated Python application development environment. Launched in 2018 and actively developed, maintained, and supported in 2024. Transforms tkinter, Qt, WxPython, and Remi into a simple, intuitive, and fun experience for both hobbyists and expert users.
OpenGene/fastp
An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
shenwei356/seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
gurusabarish/hugo-profile
A highly customizable and mobile first Hugo template for personal portfolio and blog.
pachterlab/kallisto
Near-optimal RNA-Seq quantification
crazyhottommy/scRNAseq-analysis-notes
scRNAseq analysis notes from Ming Tang
ImSoErgodic/py-upset
A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.
immunomind/immunarch
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
crazyhottommy/TCR-BCR-seq-analysis
T/B cell receptor sequencing analysis notes
ekimb/rust-mdbg
minimizer-space de Bruijn graphs (mdBG) for whole genome assembly
COMBINE-lab/alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
kanaverse/kana
Single cell analysis in the browser
griffithlab/pVACtools
phbradley/tcr-dist
Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)
crazyhottommy/papers_with_data_to_mine
published papers with a lot of data
batmen-lab/BioMANIA
nf-core/airrflow
B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework
microbiome/mia
Microbiome analysis
suinleelab/contrastiveVI
julianikulski/portfolio-website
Building a portfolio website from scratch to showcase my data science projects
FredHutch/stlite-template
Template for stlite single-page app
chizksh/digenome-toolkit2
Digenome-toolkit ver2.
ConesaLab/TCR_nextflow
nlm-irp-jianglab/ProkFunFind
🦠 A tool for identifying and analyzing functions in microbial genomes.
whhudson/spatialTCR
ashiwoku/QSAR-model
This repository contains a QSAR model that predicts the ability of a chemical compound to inhibit the gene associated with Alzheimer's, Beta-Secratese 1
WangLab-ComputationalBiology/btc-scrna-pipeline
A Nextflow pipeline for single-cell RNA-Seq dataset
McClain-Thiel/gff3_parser
A package for parsing gff3 (general feature format) files into pandas dataframes
theJasonFan/simple-sds
Simple succinct data structures (in Rust)
break-through-cancer/btc-module-catalog
A centralized repository for Nextflow modules across the BTC community