filicado

filicado's Stars

• syncthing/syncthing

  Open Source Continuous File Synchronization

  Language:Go65.3k1k5.5k4.3k

• mwaskom/seaborn

  Statistical data visualization in Python

  Language:Python12.6k2632.6k1.9k

• Tribler/tribler

  Privacy enhanced BitTorrent client with P2P content discovery

  Language:Python4.8k1453.8k449

• keepassx/keepassx

  KeePassX is a cross platform port of the windows application “Keepass Password Safe”.

  Language:C++4.5k2520622

• has2k1/plotnine

  A Grammar of Graphics for Python

  Language:Python4k64679217

• stephenturner/oneliners

  Useful bash one-liners for bioinformatics.

  1.9k15510520

• marbl/canu

  A single molecule sequence assembler for genomes large and small.

  Language:C++658542.3k179

• DaehwanKimLab/hisat2

  Graph-based alignment (Hierarchical Graph FM index)

  Language:C++47538358119

• mdshw5/pyfaidx

  Efficient pythonic random access to fasta subsequences

  Language:Python459914575

• gpertea/stringtie

  Transcript assembly and quantification for RNA-Seq

  Language:C++3782843578

• genometools/genometools

  GenomeTools genome analysis system.

  Language:C2962639364

• TransDecoder/TransDecoder

  TransDecoder source

  Language:Perl2721719159

• arq5x/poretools

  a toolkit for working with Oxford nanopore data

  Language:Jupyter Notebook2423715190

• ugeneunipro/ugene

  UGENE is free open-source cross-platform bioinformatics software

  Language:C++213216062

• omarwagih/ggseqlogo

  Publication-quality sequence logos in R

  Language:R206133630

• isovic/graphmap

  GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html Note: This was the original repository which will no longer be officially maintained. Please use the new official repository here:

  Language:C++180279745

• alyssafrazee/ballgown

  Bioconductor package "ballgown", devel version. Isoform-level differential expression analysis in R.

  Language:R1422717858

• Kingsford-Group/bloomtree

  Language:C++73121114

• bowhan/piPipes

  piRNA pipeline collection developed in the Zamore Lab and ZLab in UMass Med School

  Language:HTML5693140

• PrintsCharming/ObjectHydrator

  This project allows you to pass custom POCO's to it, and have it return an instance of the class populated with randomly generated data. This random data can be overridden by convention.

  Language:C#3951019

• lpantano/seqcluster

  small RNA analysis from NGS data

  Language:HTML3734117

• thegenemyers/DAZZ_DB

  The Dazzler Data Base

  Language:C3582933

• OpenGene/SeqMaker.jl

  (No maintenance) Next Generation Sequencing Simulation with SNP, Variation and Sequencing Error Integrated

  Language:Julia2471410

• heike/gglogo

  R package for creating sequence logo plots

  Language:R212113

• needful-software/IronPythonTutorials

  IronPython tutorials

  Language:Python92014