jnalanko

jnalanko's Stars

• jarro2783/cxxopts

  Lightweight C++ command line option parser

  Language:C++4.2k58280590

• bupticybee/TexasSolver

  🚀 A very efficient Texas Holdem GTO solver :spades::hearts::clubs::diamonds:

  Language:C++1.8k42142313

• refresh-bio/KMC

  Fast and frugal disk based k-mer counter

  Language:C++2771021672

• algbio/ggcat

  Compacted and colored de Bruijn graph construction and querying

  Language:Rust7663710

• ali1234/fullscreenhack

  A preload library that fixes fullscreen flash.

  Language:C661288

• algbio/themisto

  Space-efficient pseudoalignment with a colored de Bruijn graph

  Language:C++517284

• COMBINE-lab/kmers

  A bit-packed k-mer representation (and relevant utilities) for rust

  Language:Rust47111010

• cartoonist/kseqpp

  Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)

  Language:C++452108

• algbio/SBWT

  Code for the paper Succinct k-mer Set Representations Using Subset Rank Queries on the Spectral Burrows-Wheeler Transform (SBWT)

  Language:C++23646

• Daniel-Liu-c0deb0t/simple-saca

  Hardware go brrr bounded context suffix array construction algorithm

  Language:Rust17443

• PROBIC/mSWEEP

  mSWEEP High-resolution sweep metagenomics using fast probabilistic inference

  Language:C++134172

• deus-x-mackina/poker

  A Rust crate for evaluating poker hands

  Language:Rust125

• jnalanko/syotti

  Minimum Bait Cover Toolkit Syotti.

  Language:C++11261

• biointec/columba

  Fast Approximate Pattern Matching using Search Schemes

  Language:C++6332

• ElenaBiagi/Finito

  Language:C++6321

• Algafix/osnma-receiver

  Language:Python2311

• salkkuman/shooter

  shooter

  Language:Python2

• skrollilehti/Spektrogrammi

  Spektrogrammi (Skrolli 2020.3).

  Language:C++20

• tmaklin/alignment-writer

  Compact Themisto pseudoalignment files using BitMagic.

  Language:C++2170

• Aciid/jalopeura

  Jalopeura: A Finnish fine-tune for LLaMA

  Language:Python1100

• konsou/konso_dice_roller

  Language:Python10

• Piketulus/EM-mixtures

  Language:C++1