lubwen

lubwen's Stars

• microsoft/PowerToys

  Windows system utilities to maximize productivity

  Language:C#107k1.1k28.4k6.3k

• cemerick/jsdifflib

  A javascript library for diffing text and generating corresponding HTML views

  Language:JavaScript1.5k6123241

• OpenMS/OpenMS

  The codebase of the OpenMS project

  Language:C++470313.2k309

• haddocking/pdb-tools

  A dependency-free cross-platform swiss army knife for PDB files.

  Language:Python3761571113

• twilio/authy-php

  A PHP client for Authy

  Language:PHP2452336125

• vdemichev/DiaNN

  DIA-NN - a universal automated software suite for DIA proteomics data analysis.

  Language:C++2392160150

• veg/phylotree.js

  Interactive viewer of phylogenetic trees

  Language:JavaScript1691413371

• Shen-Lab/DeepAffinity

  Protein-compound affinity prediction through unified RNN-CNN

  Language:Python13591530

• baoilleach/deepsmiles

  DeepSMILES - A variant of SMILES for use in machine-learning

  Language:Python12881429

• dgidb/dgidb

  Rails frontend to The Genome Institute's drug gene interaction database.

  Language:Ruby954029632

• ExpressionAnalysis/ea-utils

  Automatically exported from code.google.com/p/ea-utils

  Language:C++9587367

• cmbi/hssp

  Create DSSP and HSSP files

  Language:C++841111717

• kusterlab/prosit

  Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019" DOI 10.1038/s41592-019-0426-7

  Language:Python821210046

• bzhanglab/deep_learning_in_proteomics

  A list of tools on proteomics using deep learning

  816024

• MannLabs/alphatims

  An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.

  Language:Python7893624

• Avogadro/avogadro

  Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.

  Language:C++677015

• verilylifesciences/deepmass

  DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.

  Language:Python4612712

• michalsta/opentims

  Open-source C++ and Python module for opening binary timsTOF data files.

  Language:C4131911

• bzhanglab/AutoRT

  AutoRT: Peptide retention time prediction using deep learning

  Language:Jupyter Notebook265147

• ADplugin/ADplugin

  Autodock/Vina plugin for PyMol by Daniel Seeliger

  Language:Python245427

• IFIproteomics/LFQbench

  Language:R249812

• sarisabban/Notes

  Personal Notes

  Language:Python225239

• MatteoLacki/timspy

  Language:Python15468

• kenichi-shimada/depmap-analysis

  This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between genes and helps predict the efficacy and selectivity of candidate cancer drugs"

  Language:R135

• NeilPearson-Lilly/TractaViewer

  Language:Python11045

• axelwalter/pyopenms-workshop

  pyOpenMS workshop Metabolomics Pre-Processing

  Language:Jupyter Notebook91

• bertis-informatics/deep-mrm

  DeepMRM: a targeted proteomics data interpretation tool

  Language:Python30

• cytoscape/cytoscape.js-springy

  The Springy physics simulation layout for Cytoscape.js

  Language:JavaScript31734

• wangchulab/DIAcalc

  Integrating precursors' intensity from Spectronaut data

  Language:C#2

• psobczyk/signal-peptide

  program for exploring properties of signal peptides

  Language:R1101