mehdiborji's Stars
iamadamdev/bypass-paywalls-chrome
Bypass Paywalls web browser extension for Chrome and Firefox.
microsoft/onnxruntime
ONNX Runtime: cross-platform, high performance ML inferencing and training accelerator
optuna/optuna
A hyperparameter optimization framework
CoreyMSchafer/code_snippets
jacobgil/pytorch-grad-cam
Advanced AI Explainability for computer vision. Support for CNNs, Vision Transformers, Classification, Object detection, Segmentation, Image similarity and more.
utkuozbulak/pytorch-cnn-visualizations
Pytorch implementation of convolutional neural network visualization techniques
chainer/chainer
A flexible framework of neural networks for deep learning
qubvel/segmentation_models
Segmentation models with pretrained backbones. Keras and TensorFlow Keras.
codingforentrepreneurs/30-Days-of-Python
Learn Python for the next 30 (or so) Days.
alexdobin/STAR
RNA-seq aligner
kazuto1011/grad-cam-pytorch
PyTorch re-implementation of Grad-CAM (+ vanilla/guided backpropagation, deconvnet, and occlusion sensitivity maps)
kanezaki/pytorch-unsupervised-segmentation
FrancescoSaverioZuppichini/A-journey-into-Convolutional-Neural-Network-visualization-
A journey into Convolutional Neural Network visualization
Magdoll/cDNA_Cupcake
Miscellaneous collection of Python and R scripts for processing Iso-Seq data
wdecoster/nanofilt
Filtering and trimming of long read sequencing data
enblacar/SCpubr
Generate high quality, publication ready visualizations for single cell transcriptomics data.
yjn870/REDNet-pytorch
PyTorch Implementation of image Restoration Using Very Deep Convolutional Encoder-Decoder Networks with Symmetric Skip Connections (NIPS 2016)
btcrabb/SlideSeg
A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.
svalkiers/clusTCR
CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offering functionalities for downstream analysis of clustering results.
fulcrumgenomics/fgpyo
Quality of life improvements for Bioinformatics in Python.
lsheng23/Practicum
tmclouisluk/Expectation-maximization-Algorithm-on-Image-Segmentation
markowetzlab/cytosponge-triage
This repository contains the source code for the manuscript titles 'Triage-driven diagnosis for early detection of esophageal cancer using deep learning' by Gehrung et al.
adeylab/sciMETv2
edcurry/CRCPressTextbook
Scripts for reproducing analyses described in 'Introduction to Bioinformatics with R: A Practical Guide for Biologists'
pbieberstein/SCEVT
Scaffold & Contig Exploratory Visualization Tool
SBU-BMI/multi_instance_cnn
trsvchn/stackoverflow-notebooks
Supplementary Jupyter Notebooks
LCSB-BioCore/advanced-git-practice
Practice repository advanced git training.
mehdiborji/methylation