wdecoster/nanofilt

Issues

• multithread max ram options

  #67 opened 6 months ago by ttn1883
  2

• Quality score

  #65 opened 6 months ago by eesiribloom
  1

• No logfile

  #61 opened 6 months ago by pkerbs
  2

• Cant seem to get nanofilt to work on command line?

  #66 opened 6 months ago by DrModupeO
  3

• Multi-thread mode

  #38 opened 5 years ago by ConstantinV
  3

• How to get reads with lower than 10 read quality from fastq files by using nanofilt?

  #64 opened 2 years ago by kaanokay
  8

• Tagged release for 2.8.0

  #63 opened 2 years ago by skchronicles
  2

• Error using conda install

  #62 opened 2 years ago by t-rex318
  2

• ID missing from summary file

  #45 opened 2 years ago by Electrocyte
  1

• Incomplete deflate data

  #59 opened 2 years ago by xujiaweiouc
  1

• suggestion : add a brief output report

  #47 opened 2 years ago by mariabernard
  2

• Is it possible to process fasta file

  #57 opened 2 years ago by amit4mchiba
  7

• no log file output

  #50 opened 2 years ago by hugs314
  18

• Suggestion: can you make a docker image and share in docker hub

  #58 opened 3 years ago by yzhang-github-pub
  1

• Nanostat question

  #56 opened 3 years ago by valentinavan
  2

• retaining input directory structure

  #55 opened 3 years ago by mawa86
  2

• --length and --maxlength in combination with --headcrop and --tailcrop

  #52 opened 3 years ago by PKuperus
  1

• file latency issue with nanofilt

  #53 opened 3 years ago by Fatihlrcfs
  2

• command not found , No module named 'nanofilt'

  #54 opened 3 years ago by arz19893
  1

• Order of the command options

  #51 opened 4 years ago by Yutang-ETH
  2

• NanoFilt produces empty output when tailcrop = 0

  #49 opened 4 years ago by mlosilla
  1

• Installing Nanofilt with Miniconda3

  #46 opened 4 years ago by Stephkoo
  6

• native gzip support for stdin

  #21 opened 5 years ago by tolot27
  1

• error "records in fastq files sholud start with @ character"

  #37 opened 5 years ago by AngLiRNA
  4

• The effect to assembly

  #42 opened 5 years ago by flystar233
  1

• Having Trouble Running Simple Filter Command

  #44 opened 5 years ago by Jalapenobadger
  7

• Nanofilt on a batch of files

  #43 opened 5 years ago by Alxdu
  2

• tags

  #41 opened 5 years ago by fizwit
  2

• Trimming of long read sequencing data

  #39 opened 5 years ago by mareikepol
  7

• NanoFilt.py TypeError msg

  #40 opened 5 years ago by marisalim
  11

• nanofilt failed to filter data

  #36 opened 5 years ago by maculatus
  5

• Option for min_QUALITY (logic)or min_LENGTH

  #25 opened 6 years ago by ms-gx
  2

• use git tags

  #35 opened 6 years ago by fizwit
  2

• Question about length and quality filters

  #31 opened 6 years ago by jessMaia
  3

• conda version outdated?

  #32 opened 6 years ago by leomrtns
  3

• The output file from nanofilt can't be used for other module

  #33 opened 6 years ago by henganl2
  2

• input file parameter

  #22 opened 6 years ago by tolot27
  9

• Error NanoFilt

  #30 opened 6 years ago by el-mat
  5

• Command example

  #29 opened 6 years ago by francoiskroll
  4

• Installation errors (with Python3)

  #27 opened 6 years ago by pengelgau
  3

• Weird peak in histogram of read length

  #28 opened 6 years ago by Kata-Pa
  2

• NanoFilt Won't run after install

  #26 opened 6 years ago by peflanag
  1

• use -s the sequencing_summary file to filt

  #24 opened 6 years ago by Riverzrw
  2

• problem with running the test.sh

  #23 opened 6 years ago by LinXialab
  2

• filtering by quality

  #20 opened 6 years ago by damioresegun
  2

• No module named 'nanofilt'

  #19 opened 7 years ago by jwsbio
  3

• Filtering

  #15 opened 7 years ago by damioresegun
  8

• NanoFilt won't run on CentOS

  #18 opened 7 years ago by gwaldbieser
  0

• In-line help

  #17 opened 7 years ago by genomax
  13

• Using a non-zipped file

  #16 opened 7 years ago by bluessherpa
  5