moshi4/pyGenomeViz

Issues

• Demo Page is down

  #59 opened 3 months ago by MilagrosLG
  2

• MMseqs RBH gui issue

  #58 opened 3 months ago by iaindhay
  2

• segments need better documentation

  #56 opened 4 months ago by diekhans
  1

• support annotations stacked more thant two deep

  #55 opened 4 months ago by diekhans
  1

• `feature.location.strand` raises NoneType object AttributeError in WebApp

  #54 opened 4 months ago by ilaydagulmez
  5

• how to parse exon features in new pyGenomeViz version?

  #49 opened 5 months ago by KewinOgink
  2

• How to plot discrete colorbar for link identity?

  #52 opened 4 months ago by AThivolle
  1

• Representation of enhancer links

  #50 opened 5 months ago by r-trimbour
  1

• How to show y-axis of subtracks?

  #51 opened 5 months ago by phyto
  1

• RBH value when using mmseqs rbh

  #48 opened 5 months ago by iaindhay
  1

• Tooltips not displayed in HTML viewer

  #47 opened 5 months ago by phyto
  3

• Plot genome comparison links from an existing `align_coords.tsv`

  #46 opened 5 months ago by amara86
  1

• Genome comparison visualization using fasta file

  #45 opened 5 months ago by amara86
  1

• Why pgv-pmauve doesn't report identity value

  #44 opened 6 months ago by Rohit-Satyam
  1

• display portion of contig from multi-record Genbank files

  #43 opened 6 months ago by phyto
  1

• Request to Retain Previous Version Tutorials

  #41 opened 6 months ago by Dx-wmc
  4

• How can I skip a genomic segment in the plot?

  #21 opened 6 months ago by SentientVirus
  2

• Can this align multiple chromosomes ?

  #12 opened 6 months ago by gunjanpandey
  7

• Cannot visualise rRNA units from gff file

  #38 opened 6 months ago by Edouard94
  3

• How to make the link between two tracks instead of two genes

  #39 opened 6 months ago by Dx-wmc
  3

• run error pygenomeviz

  #22 opened a year ago by sekhwal
  3

• function to specify hatch patterns

  #24 opened a year ago by sejmodha
  2

• Drawing alternative tracks

  #25 opened a year ago by evsru
  2

• BioPython genbank records

  #27 opened a year ago by sejmodha
  6

• how to change x ticks start and number?

  #20 opened a year ago by KewinOgink
  2

• Load custom dataset gbk

  #18 opened a year ago by GM110Z
  4

• Error running app.

  #17 opened a year ago by edwardb6
  1

• Some extra ideas: new features

  #14 opened a year ago by Dx-wmc
  5

• pmauve crash on WSL with Fix

  #13 opened 2 years ago by Talmonre
  2

• Not able to get the Y-axis scale for GC content plot

  #9 opened 2 years ago by Meghuser
  1

• Aborted (core dumped)

  #6 opened 2 years ago by sajjadasaf
  2

• issue with Aug 2, 2022 update

  #4 opened 2 years ago by HillLabSask
  0

• different color genes for different genomes

  #2 opened 2 years ago by madhubioinfo
  1

• minimum identity and MUMmer

  #8 opened 2 years ago by kneubehl
  2

• Pseudogene arrows are not plotted in pgv-mummer

  #7 opened 2 years ago by kneubehl
  6

• AttributeError: 'SeqFeature' object has no attribute 'strand'

  #29 opened a year ago by biogeeker
  2

• Issue with visualize.py Script Execution Leading to ValueError

  #31 opened 10 months ago by ZiliaMR
  8

• Python API changing plot coordinates

  #32 opened 9 months ago by mcn3159
  7

• can't add GFF features from object with min_range > 0

  #35 opened 8 months ago by mkarikom
  2

• GFF subtracks with feature track sub-intervals?

  #36 opened 8 months ago by mkarikom
  5