shajoezhu

Programmer, data scientist, statistician. Made in China, built in NZ, upgraded in Oxford

RocheOxford

Pinned Repositories

DEploid
dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
Language:C++20 5 22910
teal.modules.clinical
Provides teal modules for the standard clinical trials outputs
Language:R35 24 61218
tern
Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials
Language:R83 21 69624
smcsmc
Demographic inference from whole genomes
Language:C++11 5 264
Chamaeleo
BGI DNA Storage Kit
Language:Python39 4 179
scrm
A coalescent simulator for genome-scale sequences
Language:C++41 9 637
bdiBeamer
Language:TeX1 1 31
CodeMonkeysIGV
Scripts for IGV automation, etc.
Language:Perl1 1 00
R-Tutor
R语言学习资料
Language:HTML2 1 00
workshop-r-swe
Good Software Engineering Practice for R Packages
Language:Lua2 0 00

shajoezhu's Repositories

shajoezhu/workshop-r-swe
Good Software Engineering Practice for R Packages
Language:Lua2 0 00
shajoezhu/DeepLearning-500-questions
深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。全书分为15个章节，近20万字。由于水平有限，书中不妥之处恳请广大读者批评指正。未完待续............ 如有意合作，联系scutjy2015@163.com 版权所有，违权必究 Tan 2018.06
1 1 01
shajoezhu/causal_inference_r_workshop
Causal Inference in R Workshop
Language:HTML0 01
shajoezhu/china_nest_teal_gee_mmrm_demo
Language:R1 0
shajoezhu/ci-images
Insights Engineering Container Images
Language:R0 0
shajoezhu/demo-eicu
Language:TSQL1 0
shajoezhu/demo-mimic
Language:TSQL1 0
shajoezhu/dh-tern
Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials
Language:R0 0
shajoezhu/dplyr
dplyr: A grammar of data manipulation
Language:R0 0
shajoezhu/formatters
A framework for creating listings of raw data that include specialized formatting, headers, footers, referential footnotes, and pagination.
0 0
shajoezhu/handson-ml
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.
Language:Jupyter Notebook1 0
shajoezhu/hap.py
Haplotype VCF comparison tools
Language:C++1 0
shajoezhu/kedro-starter-pandas-iris
Language:Python0 0
shajoezhu/lecture_notes
0 0
shajoezhu/mmrm
Mixed Models for Repeated Measures (MMRM) in R.
Language:Rich Text Format0 0
shajoezhu/NA12878
Data and analysis for NA12878 genome on nanopore
1 0
shajoezhu/pharmaverse.r-universe.dev
For the r-universe
shajoezhu/rlistings
Value formatting and ASCII rendering infrastructure for tables and listings.
0 0
shajoezhu/rpharma-apac-2024
Language:JavaScript
shajoezhu/rtables
Reporting tables with R
Language:R0 0
shajoezhu/shajoezhu
1 0
shajoezhu/shapeit4
Segmented HAPlotype Estimation and Imputation Tool
Language:C++0 0
shajoezhu/simulatr
Language:R1 0
shajoezhu/simulatr_test
Language:R
shajoezhu/staged.dependencies
R package to implement development stages for package development
Language:R0 0
shajoezhu/stock
stock股票.获取股票数据,计算股票指标,识别股票形态,综合选股,选股策略,股票验证回测,股票自动交易,支持PC及移动设备。
shajoezhu/structure-tutorial
STRUCTURE tutorial
0 0
shajoezhu/test-colab
Language:R1 0
shajoezhu/tibble
A modern re-imagining of the data frame
Language:R0 0
shajoezhu/zstd
Zstandard - Fast real-time compression algorithm
Language:C1 0