Issues
- 0
Improve attribute data structure for gtf_scan
#177 opened by jdcla - 1
Read all gtf attribute entries when using gtf_scan.
#176 opened by jdcla - 4
Can not read ".fq" file
#163 opened by xiasijian - 6
read bam error
#171 opened by Liripo - 0
Error executing FASTQScan
#170 opened by tshauck - 0
Mark Deprecation for Reader Classes
#164 opened by tshauck - 0
Infer extension and compression from file path.
#154 opened by tshauck - 2
- 0
- 4
Investigate granges rust crate
#150 opened by ghuls - 6
name column in BED file is limited to 255 bytes.
#145 opened by ghuls - 4
Support reading BED files with less than 12 column.
#144 opened by ghuls - 1
Update user docs for new BED options
#147 opened by tshauck - 0
Integer Encoding
#137 opened by tshauck - 5
Loading in of large BAM files
#133 opened by jdcla - 5
merge paired-end sequences
#116 opened by abearab - 7
- 12
- 5
Random subsampling of reads from BAM files
#110 opened by abearab - 3
Reduce Dependencies
#109 opened by tshauck - 4
- 5
How to run polars dataframe methods on large FASTQ files in a memory efficient way
#99 opened by abearab - 0
Update https://www.wheretrue.dev/ w/ Trimming Example
#103 opened by tshauck - 8
`FastaReader` returns empty pandas dataframe
#96 opened by abearab - 1
Releases builds failing.
#98 opened by tshauck - 0
Have Missing Return Empty no `ValueError`
#83 opened by tshauck - 10
Fastq files are not fully read
#89 opened by tzeitim - 4
Deprecation points to non-existent docs
#84 opened by jguhlin - 8
Bam file loading functionality
#60 opened by jdcla - 0
Add fasta indexed reader
#10 opened by tshauck - 0
- 6
Conda-forge package?
#44 opened by Hoeze - 1
Implement Stream Arrow Reader
#2 opened by tshauck - 1
Unify BAM and VCF Indexed Readers
#7 opened by tshauck - 0
Unify Path and str args
#11 opened by tshauck - 2
Add gzip for GFF file parser
#9 opened by tshauck - 0
Automate Doc Generation
#5 opened by tshauck - 0
Compression for Sequence Files
#3 opened by tshauck