yyoshiaki/ikra

Issues

• ftp server connection failed

  #79 opened a year ago by kayotan
  0

• multiqc : searching : /home で止まる

  #78 opened 2 years ago by Takamoto36
  3

• ensembl IDで出力

  #77 opened 2 years ago by yyoshiaki
  0

• salmonの部分でうまく動きません。

  #75 opened 2 years ago by yonesora56
  7

• trimgaloreあたりでファイルの認識がうまくいかない

  #58 opened 3 years ago by mamezou10
  5

• SE,SRR modeのTrimGaloreあたりでエラーが発生します。

  #72 opened 4 years ago by szktkyk
  2

• SEのSRR modeno途中でエラーが発生します。

  #71 opened 4 years ago by szktkyk
  0

• single end？

  #56 opened 5 years ago by aibo3
  2

• fasterq-dump.2.10.0 fatal: SIGNAL - Segmentation fault

  #54 opened 5 years ago by yyoshiaki
  1

• cwl

  #3 opened 6 years ago by yyoshiaki
  6

• `--version` isn't referencing `version` function.

  #52 opened 5 years ago by yyoshiaki
  1

• docker: Error response from daemon: OCI runtime create failed: container_linux.go:345: starting container process caused "exec: \"fasterq-dump\": executable file not found in $PATH": unknown.

  #47 opened 5 years ago by ykohki
  1

• ファイル名でアンダーバーが入るとエラーが起こる

  #40 opened 5 years ago by yyoshiaki
  0

• tried_fileの保存場所

  #36 opened 6 years ago by yamami-n
  0

• udockerのエラー

  #35 opened 6 years ago by ykohki
  0

• Error: all(file.exists(files)) is not TRUE

  #34 opened 6 years ago by ykohki
  1

• PE file name (fastq branch)

  #29 opened 6 years ago by yyoshiaki
  6

• 手元のfastq filesからの実行

  #22 opened 6 years ago by yyoshiaki
  1

• 保存先の指定

  #21 opened 6 years ago by mamezou10
  2

• 名前と写真がダサい

  #28 opened 6 years ago by yyoshiaki
  3

• fasterq-dumpでとまります

  #27 opened 6 years ago by mamezou10
  5

• MakeCountTable_Illumina_trimgalore_SRR.sh: line 219: IF_TEST: unbound variableと出てしまう

  #26 opened 6 years ago by ykohki
  3

• -t 4 or --thread 4が通らない

  #25 opened 6 years ago by yyoshiaki
  8

• remove test mode

  #1 opened 6 years ago by yyoshiaki
  0

• コマンドオプションの作成

  #10 opened 6 years ago by YusukeKawasaki
  1

• fasterq-dump

  #17 opened 6 years ago by bonohu
  2

• pigz

  #19 opened 6 years ago by yyoshiaki
  1

• '--validateMappings' option to 'salmon quant'

  #16 opened 6 years ago by bonohu
  1

• DDBJから.sraをダウンロードする

  #18 opened 6 years ago by yyoshiaki
  0

• macでwgetつかえない

  #15 opened 6 years ago by yyoshiaki
  1

• MacでSalmonがとまってしまう

  #7 opened 6 years ago by ykohki
  6

• PEのテスト用のやつです

  #11 opened 6 years ago by mamezou10
  1

• trimmomaticの情報をmultiqcに取り込む

  #6 opened 6 years ago by yyoshiaki
  1

• salmon correctGC

  #13 opened 6 years ago by yyoshiaki
  0

• PEでtrimmomaticがとまります→コメントアウトの場所が問題かも

  #9 opened 6 years ago by mamezou10
  2

• trimmomaticの代わりにtrim galore!をつかう？

  #2 opened 6 years ago by yyoshiaki
  1

• top画像をつける

  #5 opened 6 years ago by yyoshiaki
  2

• RSeQC

  #4 opened 6 years ago by yyoshiaki
  1