Bioconductor

Software for the analysis and comprehension of high-throughput genomic data

Pinned Repositories

BBS
The Bioconductor Build System
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BiocManager
CRAN Package For Managing Bioconductor Packages
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bioconductor.org
Source code for the Bioconductor website
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bioconductor_docker
Docker Containers for Bioconductor
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BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
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Contributions
Contribute Packages to Bioconductor
135 27 3.7k33
CSAMA
Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology
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GenomicDataCommons
Provide R access to the NCI Genomic Data Commons portal.
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LearnBioconductor
Training material for introductory R / Bioconductor courses
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pkgrevdocs
Training Material for Community Reviewers
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Bioconductor's Repositories

Bioconductor/BioC2020
BioC2020: Where Software and Biology Connect
12 16 4811
Bioconductor/BiocAsia2020
BiocAsia2020 repository
6 12 75
Bioconductor/EuroBioc2020
European Bioconductor Conference, December, 2020
4 6 08
Bioconductor/BioC2022
BioC2022 conference material
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Bioconductor/BiocClassesWorkingGroup
Notes and Discussion concerning recommended classes for Bioconductor
2 13 14
Bioconductor/CodeOfConduct
2 10 11
Bioconductor/HMMRATAC
An R implmentation of the HMMRATAC java package https://github.com/taoliu/HMMRATAC
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Bioconductor/AnnotationHubServer3.0
the ruby version of AnnotationHubServer
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Bioconductor/archive
1 3 0
Bioconductor/BCC2020
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Bioconductor/BiocKubeInstall
Build Bioconductor package binaries using Kubernetes on GKE or AKS
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Bioconductor/anvil-docker
Docker containers for Anvil Project
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Bioconductor/anvil-portal
The front-facing AnVIL user portal
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Bioconductor/AnVILHMMRATAC
Repo that corresponds to the AnVIL HMMRATAC workflow
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Bioconductor/assessr
Assessing abstracts for Bioconductor 2020 conference
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Bioconductor/BiocBinaryPackageTools
WIP package of ideas for querying available Bioconductor binary packages
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Bioconductor/biocbranchrename
This is a test package for testing the branch renaming for Bioconductor
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Bioconductor/BiocGPU
Usage of Bioconductor packages on GPUs, available docker images for bioconductor-ml
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Bioconductor/Bioconductor_Codespaces
Testing scripts for Bioconductor codespaces
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Bioconductor/BranchRename
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Bioconductor/EuroBioc2016
2016 European Bioconductor Meeting archive
1
Bioconductor/Gen3
AnVIL interface to Gen3 data resources
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Bioconductor/git-hooks
Bioconductor git hooks which are deployed on every Bioconductor package repository
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Bioconductor/hcamatrixapi
:warning: Deprecated (see new project below)
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Bioconductor/hcaquery
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Bioconductor/HMMRATACData
Contains data for vignettes and examples in HMMRATAC package
9 0
Bioconductor/HubServer
Server side code for ExperimentHub
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Bioconductor/OrchestratingSingleCellAnalysis-devel
Compiled output of the OSCA book on BioC-devel
10 0
Bioconductor/salmon_quant
Quantify RNA-seq data using Salmon
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Bioconductor/test-codespaces
Github test for codespaces
9 0