JING-XINXING

JING-XINXING's Stars

• Mintplex-Labs/anything-llm

  The all-in-one Desktop & Docker AI application with built-in RAG, AI agents, and more.

  Language:JavaScript27.6k2151.7k2.8k

• plotly/plotly.py

  The interactive graphing library for Python :sparkles: This project now includes Plotly Express!

  Language:Python16.3k2753k2.6k

• THUDM/ChatGLM3

  ChatGLM3 series: Open Bilingual Chat LLMs | 开源双语对话语言模型

  Language:Python13.5k987841.6k

• johannesjo/super-productivity

  Super Productivity is an advanced todo list app with integrated Timeboxing and time tracking capabilities. It also comes with integrations for Jira, Gitlab, GitHub and Open Project.

  Language:TypeScript12k1302k932

• GoesToEleven/GolangTraining

  Training for Golang (go language)

  Language:Go9.9k640323.6k

• voila-dashboards/voila

  Voilà turns Jupyter notebooks into standalone web applications

  Language:Python5.5k73743505

• preservim/nerdcommenter

  Vim plugin for intensely nerdy commenting powers

  Language:Vim Script5k62250447

• huggingface/huggingface_hub

  The official Python client for the Huggingface Hub.

  Language:Python2.1k59987559

• jupyter-incubator/sparkmagic

  Jupyter magics and kernels for working with remote Spark clusters

  Language:Python1.3k48435447

• KyleBanks/depth

  Visualize Go Dependency Trees

  Language:Go948151566

• ScoopInstaller/Install

  📥 Next-generation Scoop (un)installer

  Language:PowerShell7902551100

• DerrickWood/kraken2

  The second version of the Kraken taxonomic sequence classification system

  Language:C++73130835274

• xia-lab/MetaboAnalystR

  R package for MetaboAnalyst

  Language:R31923301158

• biobakery/MetaPhlAn

  MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

  Language:Python3042020586

• jinworks/CellChat

  R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

  Language:R295224352

• jenniferlu717/Bracken

  Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

  Language:C++2941326250

• rstudio/tinytex-releases

  Windows/macOS/Linux binaries and installation methods of TinyTeX

  Language:PowerShell26573229

• biobakery/humann

  HUMAnN is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).

  Language:Python174164158

• Ensembl/VEP_plugins

  Plugins for the Ensembl Variant Effect Predictor (VEP)

  Language:Perl14122209117

• vors/jupyter-powershell

  PowerShell language kernel for Jupyter

  Language:Jupyter Notebook137122726

• 10XGenomics/loupeR

  Convert Seurat objects to 10x Genomics Loupe files.

  Language:R100105215

• zhou-lab/biscuit

  BISulfite-seq CUI Toolkit

  Language:C6394124

• supercoderz/redis_kernel

  A simple kernel to interact with a redis database from IPython

  Language:Python223

• xia-lab/OptiLCMS

  R package for optimized LC-MS spectra processing

  Language:C213104

• 3Nigma/nelu-kernelu

  Yet Another Node.JS Kernel for the Jupyter Notebook :man:

  Language:JavaScript20476

• mgtools/MinPath

  MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achieving a more conservative, yet more faithful, estimation of the biological pathways for a query dataset.

  Language:C20289

• marbl/T2T-Browser

  Genome browser hub for the T2T genomes and resources

  Language:HTML16803

• Sentieon/Sentieon-WDL

  WDL pipelines for the Sentieon tools

  Language:WDL9213

• genid/de-goulash

  Genetic deconvolution of barcoded single cell RNA-seq

  Language:C7100

• Debian/fastx-toolkit

  FASTA/FASTQ pre-processing programs

  Language:C51603