RDoerfel

RDoerfel's Stars

• meta-llama/codellama

  Inference code for CodeLlama models

  Language:Python15.4k1761901.8k

• awesome-mlss/awesome-mlss

  🤖 Machine Learning Summer School deadlines

  Language:HTML2.6k26148297

• nilearn/nilearn

  Machine learning for NeuroImaging in Python

  Language:Python1.1k702k580

• skrub-data/skrub

  Prepping tables for machine learning

  Language:Python1.1k2130291

• rmcelreath/stat_rethinking_2024

  Language:R80152290

• ANTsX/ANTsPy

  A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.

  Language:Python58615444161

• freesurfer/freesurfer

  Neuroimaging analysis and visualization suite

  Language:C++56031207237

• clu0/unet.cu

  UNet diffusion model in pure CUDA

  Language:Cuda5022021

• JJGO/UniverSeg

  UniverSeg: Universal Medical Image Segmentation

  Language:Python48092949

• bids-standard/bids-specification

  Brain Imaging Data Structure (BIDS) Specification

  Language:Python26529712154

• scientific-python/cookie

  Scientific Python Library Development Guide and Cookiecutter

  Language:Python25296350

• spinalcordtoolbox/spinalcordtoolbox

  Comprehensive and open-source library of analysis tools for MRI of the spinal cord.

  Language:Python193292.9k101

• neuronets/nobrainer

  A framework for developing neural network models for 3D image processing.

  Language:Python1521115846

• nipreps/smriprep

  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

  Language:Python1261418237

• yetianmed/subcortex

  Language:MATLAB954929

• Milan-BUAA/TSAN-brain-age-estimation

  TSAN: Two-Stage-Age-Net, for brain age estimation from T1-weighted MRI data.

  Language:Python532107

• probabilisticai/nordic-probai-2024

  Materials of the Nordic Probabilistic AI School 2024.

  Language:Jupyter Notebook466014

• Novestars/Neural_Pre_Processing

  Neural Pre Processing is an end-to-end weakly supervised learning approach for converting raw head MRI images to intensity-normalized, skull-stripped brain in a standard coordinate space

  Language:Python244

• openneuropet/PET2BIDS

  PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets

  Language:Python24411720

• alanqrwang/brainmorph

  A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration

  Language:Python20134

• pBFSLab/DeepPrep

  DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning

  Language:Python182136

• predictive-clinical-neuroscience/NM_educational_OHBM24

  normative modelling educational course OHBM24

  Language:Jupyter Notebook161

• FiRMLAB-Pisa/pySynthMRI

  PysynthMRI is a python open-source tool which provides a user-friendly interface to synthesize contrast weighted images.

  Language:Python141

• rwindsor1/biobank-self-supervised-alignment

  Code for MICCAI 2021 submission 'Self-Supervised Multi-Modal Alignment For Whole Body Medical Imaging'

  Language:Jupyter Notebook14203

• westman-neuroimaging-group/brainage-prediction-mri

  Predicting the age of the brain with minimally processed T1-weighted MRI data

  Language:Python81

• netneurolab/hansen_brainstemfc

  Data and code supporting Hansen et al., 2023 bioRxiv "Integrating brainstem and cortical functional architectures"

  Language:Python6302

• CRAI-OUS/MUSTER

  Multi Session Temporal Registration

  Language:Python4100

• mnoergaard/petprep

  Language:Jupyter Notebook4171

• mathesong/OHBM2024_tutorial

  A short tutorial on PET modelling for OHBM2024

  Language:HTML3

• mnhng/CoPA

  Language:Python2101