af8's Stars
awesome-selfhosted/awesome-selfhosted
A list of Free Software network services and web applications which can be hosted on your own servers
nocodb/nocodb
🔥 🔥 🔥 Open Source Airtable Alternative
lmcinnes/umap
Uniform Manifold Approximation and Projection
tezc/sc
Common libraries and data structures for C.
cmdcolin/awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
ReeceGoding/Frustration-One-Year-With-R
An extremely long review of R.
zaeleus/noodles
Bioinformatics I/O libraries in Rust
dellytools/delly
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
deweylab/RSEM
RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
fulcrumgenomics/fgbio
Tools for working with genomic and high throughput sequencing data.
amplab/snap
Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
CompEpigen/figeno
Tool for plotting sequencing data along genomic coordinates.
The-Sequence-Ontology/Specifications
GFF and GVF specification documents
mskcc/RNAseqDB
adamewing/methylartist
Tools for plotting methylation data in various ways
tobiasrausch/wally
Wally: Visualization of aligned sequencing reads and contigs
telatin/seqfu2
:rocket: seqfu - Sequece Fastx Utilities
parklab/xTea
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
romanhaa/Cerebro
Visualization of scRNA-seq data.
vanallenlab/comut
CoMut is a Python library for visualizing genomic and phenotypic information via comutation plots
xihaoli/STAAR
An R package for performing STAAR procedure in whole-genome sequencing studies
vib-singlecell-nf/vsn-pipelines
A repository of pipelines for single-cell data in Nextflow DSL2
telatin/bamtocov
🏔 coverage extraction from BAM/CRAM files, supporting targets 📊
d3b-center/annoFuse
Filter and prioritize fusion calls
NourMarzouka/multiclassPairs
Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.
annalam/mutato
Mutato is a toolkit for mutation analysis using DNA sequencing data
RibosomeCRCL/rRMSAnalyzer
A set of easy-to-use functions to analyze end read count data of RiboMethSeq (RNA 2'Ome)
RibosomeCRCL/ribomethseq-nf
Nextflow pipeline dedicated to RiboMethSeq data processing
stjude/fuzzion2
fuzzy fusion finder
BioinfoGP/Rgff
R Utilities for Gff Files