Issues
- 10
Issue with running dcHiC
#102 opened by rkash - 2
functionsdchic install error
#101 opened by IcyYeyangchen - 13
The program segfaults on ubuntu 22.04
#99 opened by bhristov6 - 4
Issue with pandoc
#100 opened by Weiming113 - 1
Identify differential compartment bins from a user-defined PC1 table of five time points
#95 opened by Jiangyuan-Liu - 7
error at pcatype=cis level
#98 opened by Sen0108 - 6
Error in step 2 of the run_dchic.sh script
#72 opened by asgda - 4
recommended or default p-value/p-adj cutoff
#97 opened by usernicai - 2
pca select error: hclust
#92 opened by katecycho - 2
pcatype enrich gene list error
#96 opened by katecycho - 1
A question about Fig 5C legend "membership"
#94 opened by Jiangyuan-Liu - 2
Can't get --bdgfile flag to work.
#93 opened by RomeroMatt - 8
Error: not enough observations
#91 opened by katecycho - 3
error running trans
#85 opened by katecycho - 2
Question regarding enrich
#90 opened by RomeroMatt - 3
Error: upper value must be greater than lower value after removing X, Y, M chromosomes
#88 opened by yardimcilab - 2
issue with html
#89 opened by katecycho - 2
In function `geneEnrichment`, the "pcQnm" bedgraph is loaded when `pcgrp `= "pcOri" — is this correct?
#86 opened by kalavattam - 3
error in hclust (--pcatype select)
#84 opened by katecycho - 11
error: arguments imply differing number of rows
#83 opened by katecycho - 6
Error running FitHiC step in dcHiC workflow for cis interactions: `Error in ids_sample[[i]] : subscript out of bounds`
#81 opened by kalavattam - 6
- 5
question about input/sample subtypes
#82 opened by katecycho - 6
Error during subcompartment calling
#77 opened by TH-L - 0
Solution of installation error for hashmap package
#79 opened by ay-lab - 10
Issue with FitHiC implementation
#78 opened by asgda - 4
My input hic file contains chr1, chr2, chr3..... instead of 1, 2, 3..... and therefore shows error when I preprocess the hic files for running dchic
#76 opened by asgda - 2
Small bug in utillities/preprocess.py + solution, 'chromosome not found in the file' error.
#67 opened by lauhinojosa - 2
- 11
- 4
error in hclust (--pcatype select)
#47 opened by Nico-FR - 2
Normalized counts or raw counts?
#48 opened by Nico-FR - 3
hashmap
#49 opened by EnrichettaMileti - 6
dloop error
#58 opened by Zheng19w - 5
error when running cis and analysis
#69 opened by catherine0202 - 2
--pcatype cis crashing
#71 opened by wkc1986 - 5
- 2
`numberclust` parameter
#51 opened by YichaoOU - 2
- 3
- 1
running dhHiC on nf-core hic pipeline output file
#55 opened by chklopp - 10
- 9
Genome selection problem
#57 opened by Zheng19w - 6
The difference between calculations for weighted center across replicates or samples
#61 opened by dangdachang - 4
Error while installing functionsdchic
#63 opened by Lucas446 - 12
Visualization
#65 opened by Lucas446 - 8
Error for trans
#68 opened by YH-Li7 - 2
- 1
- 2