broadinstitute/cromshell

Issues

• example for cromshell

  #281 opened 3 months ago by solivehong
  0

• Local pip install fails

  #277 opened 5 months ago by sjfleming
  1

• QueuedInCromwell task status not recognized

  #280 opened 10 months ago by notestaff
  1

• aliasing submissions when `submit`ting

  #173 opened 3 years ago by SHuang-Broad
  1

• Request to add a command to validate WDLs through cromshell.

  #261 opened a year ago by bshifaw
  2

• Change to "cromshell" instead of "cromshell-draft-release"

  #267 opened a year ago by bshifaw
  0

• Log4j vulnerability

  #270 opened a year ago by j-p-courneya
  3

• Cromshell2.0 crashes for server that worked on cromshell 1

  #269 opened a year ago by jamesemery
  1

• Readme is getting long, add table of content or create a site

  #266 opened a year ago by bshifaw
  0

• pip installed cromshell may have a dependency issue

  #264 opened a year ago by SHuang-Broad
  1

• can't access workflow logs from AoU RWB

  #260 opened a year ago by ruchim
  4

• Brew tap for cromshell@0.5.3 appears to be broken

  #263 opened a year ago by jamesemery
  0

• Error running cromshell due to incompatible protobuf version

  #258 opened 2 years ago by bshifaw
  0

• Bother Cromwell team until they implement notification

  #251 opened 2 years ago by lbergelson
  4

• FR: Cromshell support for no-turtle mode

  #225 opened 2 years ago by mbookman
  3

• Add a way to track resource usage for a submitted workflow

  #254 opened 2 years ago by bshifaw
  0

• Add clean-up command to CS2

  #253 opened 2 years ago by bshifaw
  0

• Add option to logs command to download logs

  #252 opened 2 years ago by bshifaw
  0

• Have the cost command indicate which tasks were call-cached

  #250 opened 2 years ago by bshifaw
  0

• Make `list-outputs` give back not only files, but naive types too

  #187 opened 3 years ago by SHuang-Broad
  1

• cromshell-beta logs KeyError

  #246 opened 2 years ago by wharvey31
  3

• Using pytest-cov for test coverage

  #227 opened 2 years ago by SHuang-Broad
  1

• Implement Lazy Loading of Commands

  #245 opened 2 years ago by bshifaw
  0

• Create a convention for how we report errors.

  #243 opened 2 years ago by bshifaw
  0

• submit command could go one step further

  #193 opened 2 years ago by SHuang-Broad
  7

• Verify which commits from master is worth pulling in before cromshell 2.0 beta

  #226 opened 2 years ago by SHuang-Broad
  0

• FR: Cromshell support for non-interactive setup

  #224 opened 2 years ago by mbookman
  8

• cromshell wait -w cannot find wdl id

  #223 opened 2 years ago by yuhuyoyo
  1

• Have Cromshell call cromwell logs api instead of metadata api

  #222 opened 2 years ago by bshifaw
  0

• `update-server` command

  #199 opened 2 years ago by sjfleming
  0

• Old database files incompatible with 2.0

  #212 opened 2 years ago by sjfleming
  0

• Missing requirement: `gcsfs`

  #217 opened 2 years ago by sjfleming
  0

• Cromshell update-server should provide a list of all previously connected servers

  #216 opened 3 years ago by jamesemery
  1

• WDL validation fails when it requires a dependency zip

  #139 opened 4 years ago by tnguyensanger
  2

• Feature request: "preempt" job (as opposed to "abort")

  #158 opened 4 years ago by sjfleming
  11

• Expose curl header for oauth

  #174 opened 3 years ago by microbioticajon
  7

• Cromshell2.0 status command should accept multiple workflow IDs

  #189 opened 3 years ago by kvg
  0

• add a command to open a browser page for the execution bucket

  #191 opened 3 years ago by SHuang-Broad
  3

• CRITICAL: job status reported by "cromshell list -u" is incorrect and never updates.

  #182 opened 3 years ago by dalessioluca
  6

• More validation of WDLs

  #181 opened 3 years ago by SHuang-Broad
  2

• `execution-status-count` parses alias wrong

  #177 opened 3 years ago by SHuang-Broad
  0

• new command assisting debugging [day-dream]

  #176 opened 3 years ago by SHuang-Broad
  1

• `Cost`: Add check that big query has been initialized with defaults

  #171 opened 3 years ago by jonn-smith
  0

• Timing URL is missing a colon

  #167 opened 3 years ago by cwhelan
  1

• Output should include alias when available

  #161 opened 3 years ago by SHuang-Broad
  1

• Difference in installation between brew and conda

  #154 opened 4 years ago by dalessioluca
  4

• "cromshell list" gives incorrect information after a "cromshell abort" command

  #153 opened 4 years ago by dalessioluca
  3

• Cromshell should make a zip file of your WDLs for you

  #152 opened 4 years ago by jonn-smith
  0

• Cromshell won't communicate on HPC

  #147 opened 4 years ago by hevmarriott
  1

• Add interface to Firecloud

  #141 opened 4 years ago by jonn-smith
  1