emilydolivo97

Pinned Repositories

• freebayes

  Bayesian haplotype-based genetic polymorphism discovery and genotyping.

  Language:C++79046690265

• nanopolish

  Signal-level algorithms for MinION data

  Language:C++568361k159

• minipileup

  Simple pileup-based variant caller

  Language:C834156

• Flye

  De novo assembler for single molecule sequencing reads using repeat graphs

  Language:C78930698168

• VariantDetective

  Identify short variants and structural variants from raw sequencing data or genomic sequences

  Language:Python152111

• fastp

  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

  Language:C++1.9k50522333

• longshot

  diploid SNV caller for error-prone reads

  Language:Rust19159526

• bcftools

  This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

  Language:C680482k240

emilydolivo97's Repositories