Modularization of sagelib: Break out a separate package sagemath-standard-no-symbolics

Question

Modularization of sagelib: Break out a separate package sagemath-standard-no-symbolics

mkoeppe opened this issue 4 years ago · 164 comments

This is a subset distribution that includes all of sagemath-standard except for sage.symbolic and modules that use that.

As preparation, we remove gratuitous module-level imports from sage.symbolic, sage.functions, sage.calculus which block this modularization.

either by making these imports lazy_import
or by moving module-level imports to individual methods
or by replacing unnecessary uses of symbolic functions
or by using .abc (see #32414)
The command git grep -E '^from.*sage[.](symbolic|calculus|functions).*import' helps to find these imports.
#32411/#32413/#32415/#32416: Remove unnecessary uses of SR and symbolic functions
#32599: sage.structure, sage.sets: Remove hard dependencies on the symbolic ring / polynomial rings
#32593: sage.modules, sage.matrix: Remove import-time dependencies on the symbolic ring
#32708: sage.tensor.modules: remove dependency on sage.manifolds
#32712 sage.tensor.modules: make doctests involving SR optional
#32717: Remove use of sage.functions.other.sqrt (outside of sage.symbolic, sage.functions, sage.manifolds)
#32731: Avoid ceil, floor from sage.functions.other in non-symbolic uses
#32794: sage.functions.log.log: Move to sage.misc.functional
#33392: sage.matrix: Modularization fixes after #33159
#32724: Replace ... is SR by isinstance(..., sage.rings.abc.SymbolicRing) to handle symbolic subrings
#32609 Remove more unnecessary uses of SR and symbolic functions in sage.combinat
#34215 Removing remaining uses of is_CallableSymbolicExpression
#34217 sage.combinat.finite_state_machine: Remove use of "var"
#25827: Methods __round__, __trunc__, __floor__, __ceil__
#32718: Remove module-level imports from sage.symbolic etc. (outside of sage.symbolic, sage.calculus etc.)
#32721: Remove abuse of predefined x in doctests
#33673: sage.categories.classical_crystals: Remove use of sage.symbolic
#33674: sage.combinat.root_system.coxeter_type: Replace module-level import of SR

To test:

./bootstrap && ./configure && make build && ./sage -sh -c '(cd pkgs/sagemath-standard-no-symbolics && SAGE_NUM_THREADS=16 tox -v -v -v -e sagepython-sagewheels-nopypi)'

See also:

#31695 Modularization of sagelib: Break out separate package sagemath-symbolics

Depends on #34547
Depends on #16522
Depends on #34855

CC: @kliem @egourgoulhon @tobiasdiez @anneschilling

Component: refactoring

Issue created by migration from https://trac.sagemath.org/ticket/32601

Answer 1 · 2021-10-02T00:50:24.000Z

Changed dependencies from #29865 to #29865, #32599, #32593

Answer 2 · 2021-10-02T01:55:30.000Z

Description changed:

--- 
+++ 
@@ -1,2 +1,8 @@
 This is a subset distribution that includes all of `sagemath-standard` except for `sage.symbolic` and modules that use that.
 
+To test:
+
+```
+./bootstrap && make build && ./sage -sh -c '(cd pkgs/sagemath-standard-no-symbolics && tox -v -v -v -e python-sagewheels-nopypi)'
+```
+

Answer 3 · 2021-10-02T01:56:38.000Z

Changed dependencies from #29865, #32599, #32593 to #32575, #29865, #32599, #32593

Answer 4 · 2021-10-02T02:00:02.000Z

Changed dependencies from #32575, #29865, #32599, #32593 to #32575, #32442, #29865, #32599, #32593

Answer 5 · 2021-10-02T02:15:31.000Z

Branch: u/mkoeppe/modularization_of_sagelib__break_out_a_separate_package_sagemath_standard_no_symbolics

Answer 6 · 2021-10-02T05:20:08.000Z

Last 10 new commits:

`adae38e`	`trac 32575: Sphinx's install-requires.txt: allow version 4.2`
`1131c86`	`Merge #32575`
`8af6041`	`Merge tag '9.5.beta2' into t/32442/__configure__make___with_sage_venv_the_default`
`b3f7d34`	`.gitignore: Add /venv`
`fc4b641`	`configure.ac: Remove conveniene symlinks before (re)creating them`
`8bcbf1d`	`Makefile (distclean): Remove convenience symlinks prefix, venv`
`dcb4a08`	`configure.ac: Indicate default in help string for --with-sage-venv`
`9a63841`	`Merge #32442`
`934fc6b`	`src/setup.cfg.m4, src/pyproject.toml.m4: Add memory_allocator`
`89bb042`	`pkgs/sagemath-standard-no-symbolics: Fixup`

Answer 7 · 2021-10-02T05:20:08.000Z

Commit: 89bb042

Answer 8 · 2021-10-02T05:20:08.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593 to #32575, #32442, #29865, #32599, #32593, #32608

Answer 9 · 2021-10-02T05:45:23.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`80baf7b`	`sage.{dynamics,geometry,interfaces}.all: Use lazy_import for imports from modules not in sagemath-standard-no-symbolics`

Answer 10 · 2021-10-02T05:45:23.000Z

Changed commit from 89bb042 to 80baf7b

Answer 11 · 2021-10-02T15:35:42.000Z

comment:8

    from sage.quadratic_forms.genera.genus import genera
  File "/Users/mkoeppe/s/sage/sage-rebasing/worktree-gcc11/pkgs/sagemath-standard-no-symbolics/.tox/python-sagewheels-nopypi/lib/python3.9/site-packages/sage/quadratic_forms/genera/genus.py", line 35, in <module>
    from sage.functions.gamma import gamma
ModuleNotFoundError: No module named 'sage.functions'

Answer 12 · 2021-10-02T16:24:20.000Z

Description changed:

--- 
+++ 
@@ -1,4 +1,11 @@
 This is a subset distribution that includes all of `sagemath-standard` except for `sage.symbolic` and modules that use that.
+
+As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus`. `git grep -E 'sage[.](symbolic|calculus|functions).*import'` helps to find them.
+
+- #32411/#32413/#32415/#32416: Remove unnecessary uses of `SR` and symbolic functions
+- #32599: `sage.structure`, `sage.sets`: Remove hard dependencies on the symbolic ring / polynomial rings
+- #32593: `sage.modules`, `sage.matrix`: Remove import-time dependencies on the symbolic ring
+
 
 To test:

Answer 13 · 2021-10-02T16:29:06.000Z

Description changed:

--- 
+++ 
@@ -1,6 +1,6 @@
 This is a subset distribution that includes all of `sagemath-standard` except for `sage.symbolic` and modules that use that.
 
-As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus`. `git grep -E 'sage[.](symbolic|calculus|functions).*import'` helps to find them.
+As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus`. The command `git grep -E '^from.*sage[.](symbolic|calculus|functions).*import'` helps to find them.
 
 - #32411/#32413/#32415/#32416: Remove unnecessary uses of `SR` and symbolic functions
 - #32599: `sage.structure`, `sage.sets`: Remove hard dependencies on the symbolic ring / polynomial rings

Answer 14 · 2021-10-02T16:54:33.000Z

Description changed:

--- 
+++ 
@@ -3,6 +3,7 @@
 As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus`. The command `git grep -E '^from.*sage[.](symbolic|calculus|functions).*import'` helps to find them.
 
 - #32411/#32413/#32415/#32416: Remove unnecessary uses of `SR` and symbolic functions
+- #32609 Remove more unnecessary uses of `SR` and symbolic functions in `sage.combinat`
 - #32599: `sage.structure`, `sage.sets`: Remove hard dependencies on the symbolic ring / polynomial rings
 - #32593: `sage.modules`, `sage.matrix`: Remove import-time dependencies on the symbolic ring

Answer 15 · 2021-10-02T19:53:38.000Z

Description changed:

--- 
+++ 
@@ -1,6 +1,11 @@
 This is a subset distribution that includes all of `sagemath-standard` except for `sage.symbolic` and modules that use that.
 
-As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus`. The command `git grep -E '^from.*sage[.](symbolic|calculus|functions).*import'` helps to find them.
+As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus` which block this modularization.
+- either by making these imports `lazy_import`
+- or by moving module-level imports to individual methods
+- or by replacing unnecessary uses of symbolic functions
+- or by using .abc (see #32414)
+The command `git grep -E '^from.*sage[.](symbolic|calculus|functions).*import'` helps to find these imports.
 
 - #32411/#32413/#32415/#32416: Remove unnecessary uses of `SR` and symbolic functions
 - #32609 Remove more unnecessary uses of `SR` and symbolic functions in `sage.combinat`

Answer 16 · 2021-10-17T19:39:53.000Z

Description changed:

--- 
+++ 
@@ -11,7 +11,7 @@
 - #32609 Remove more unnecessary uses of `SR` and symbolic functions in `sage.combinat`
 - #32599: `sage.structure`, `sage.sets`: Remove hard dependencies on the symbolic ring / polynomial rings
 - #32593: `sage.modules`, `sage.matrix`: Remove import-time dependencies on the symbolic ring
-
+- #32708: `sage.tensor.modules`: remove dependency on `sage.manifolds`
 
 To test:

Answer 17 · 2021-10-17T19:39:53.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608 to #32575, #32442, #29865, #32599, #32593, #32608, #32708

Answer 18 · 2021-10-17T19:45:36.000Z

Description changed:

--- 
+++ 
@@ -1,4 +1,4 @@
-This is a subset distribution that includes all of `sagemath-standard` except for `sage.symbolic` and modules that use that.
+This is a subset distribution that includes all of **sagemath-standard** except for `sage.symbolic` and modules that use that.
 
 As preparation, we remove gratuitous module-level imports from `sage.symbolic`, `sage.functions`, `sage.calculus` which block this modularization.
 - either by making these imports `lazy_import`
@@ -19,3 +19,5 @@
 ./bootstrap && make build && ./sage -sh -c '(cd pkgs/sagemath-standard-no-symbolics && tox -v -v -v -e python-sagewheels-nopypi)'
 ```
 
+See also:
+- #31695 Modularization of sagelib: Break out separate package **sagemath-symbolics**

Answer 19 · 2021-10-18T20:19:14.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608, #32708 to #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712

Answer 20 · 2021-10-18T21:41:49.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712 to #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619

Answer 21 · 2021-10-18T21:42:01.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`b484d51`	`src/sage/symbolic/callable.py: Fixup`
`fad87c0`	`Expression.is_callable: New`
`4bc059b`	`src/sage/ext/fast_callable.pyx: Remove use of is_CallableSymbolicExpression`
`8624925`	`src/sage/symbolic/ring.pyx: Update doctest output with deprecation warning`
`37da733`	`src/sage/sets/condition_set.py: Remove use of is_CallableSymbolicExpression`
`80a8f9e`	`sage.plot: Remove use of is_CallableSymbolicExpression, is_SymbolicEquation`
`a287531`	`src/sage/schemes/elliptic_curves/constructor.py: Remove use of SR, is_SymbolicEquation; add test for symbolic input`
`c9861d1`	`src/sage/interfaces/qepcad.py: Remove use of is_SymbolicEquation`
`341337a`	`src/sage/ext/fast_callable.pyx: Remove use of is_SymbolicVariable`
`2c02ba9`	`Merge #32665`

Answer 22 · 2021-10-18T21:42:01.000Z

Changed commit from 80baf7b to 2c02ba9

Answer 23 · 2021-10-18T22:25:58.000Z

Description changed:

--- 
+++ 
@@ -16,7 +16,7 @@
 To test:
 
 ```
-./bootstrap && make build && ./sage -sh -c '(cd pkgs/sagemath-standard-no-symbolics && tox -v -v -v -e python-sagewheels-nopypi)'
+./bootstrap && make build && ./sage -sh -c '(cd pkgs/sagemath-standard-no-symbolics && SAGE_NUM_THREADS=16 tox -v -v -v -e py39-sagewheels-nopypi)'
 ```
 
 See also:

Answer 24 · 2021-10-18T23:04:06.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`e9fc48d`	`Merge tag '9.5.beta3' into t/29865/t/29865-modularizarion-sage-objects`
`f79f0f8`	`pkgs/sagemath-objects/setup.py: On sdist or egg_info, do not run find_python_sources`
`9600217`	`pkgs/sagemath-objects/tox.ini: passenv SAGE_NUM_THREADS*`
`6bd807b`	`pkgs/sagemath-categories/tox.ini: passenv SAGE_NUM_THREADS*`
`c60d2d4`	`Merge #29865`
`c38d3d6`	`src/requirements.txt.m4: Add memory_allocator`

Answer 25 · 2021-10-18T23:04:06.000Z

Changed commit from 2c02ba9 to c38d3d6

Answer 26 · 2021-10-18T23:11:08.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`efb68ff`	`src/sage/quadratic_forms/genera/genus.py: Move imports from sage.functions, sage.symbolic into method`

Answer 27 · 2021-10-18T23:11:08.000Z

Changed commit from c38d3d6 to efb68ff

Answer 28 · 2021-10-18T23:18:28.000Z

Description changed:

--- 
+++ 
@@ -12,6 +12,8 @@
 - #32599: `sage.structure`, `sage.sets`: Remove hard dependencies on the symbolic ring / polynomial rings
 - #32593: `sage.modules`, `sage.matrix`: Remove import-time dependencies on the symbolic ring
 - #32708: `sage.tensor.modules`: remove dependency on `sage.manifolds`
+- #32712 `sage.tensor.modules`: make doctests involving `SR` optional
+- #32717: Remove use of `sage.functions.other.sqrt` (outside of `sage.symbolic`, `sage.functions`, `sage.manifolds`)
 
 To test:

Answer 29 · 2021-10-18T23:48:09.000Z

Description changed:

--- 
+++ 
@@ -14,6 +14,7 @@
 - #32708: `sage.tensor.modules`: remove dependency on `sage.manifolds`
 - #32712 `sage.tensor.modules`: make doctests involving `SR` optional
 - #32717: Remove use of `sage.functions.other.sqrt` (outside of `sage.symbolic`, `sage.functions`, `sage.manifolds`)
+- #25827: Methods `__round__`, `__trunc__`, `__floor__`, `__ceil__`
 
 To test:

Answer 30 · 2021-10-19T00:42:53.000Z

Changed commit from efb68ff to 0a90634

Answer 31 · 2021-10-19T00:42:53.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`a8caa9e`	`src/sage/quadratic_forms: Move imports from sage.functions into methods`
`0a90634`	`src/sage/sat/converters/polybori.py: Use ceil method instead of sage.functions.other.ceil`

Answer 32 · 2021-10-19T00:45:59.000Z

Description changed:

--- 
+++ 
@@ -15,6 +15,7 @@
 - #32712 `sage.tensor.modules`: make doctests involving `SR` optional
 - #32717: Remove use of `sage.functions.other.sqrt` (outside of `sage.symbolic`, `sage.functions`, `sage.manifolds`)
 - #25827: Methods `__round__`, `__trunc__`, `__floor__`, `__ceil__`
+- #32718: Remove module-level imports from `sage.symbolic` etc. (outside of `sage.symbolic`, `sage.calculus` etc.)
 
 To test:

Answer 33 · 2021-10-19T05:18:42.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619 to #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619, #32635

Answer 34 · 2021-10-19T05:23:07.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`ac58286`	`Matrix.gram_schmidt: Use sage.rings.abc`
`6d4ee6e`	`Matrix.gram_schmidt: Use sage.rings.abc (fixup)`
`3ea1f8b`	`Merge #32635`
`ddaf8d4`	`src/sage/modular/pollack_stevens/dist.pyx: Remove unused import`
`75bb729`	`src/sage/quadratic_forms/ternary.pyx: Remove unused import`
`77075d5`	`src/sage/lfunctions/zero_sums.pyx: Move import from sage.symbolic into method`
`072f1a7`	`src/sage/combinat/crystals/tensor_product_element.pyx: Remove unused import`
`2623ef9`	`src/sage/rings/polynomial/weil/weil_polynomials.pyx: Replace use of sage.functions.generalized.sgn by method .sign()`
`0ce36ac`	`src/sage/groups/braid.py: Replace use of sage.functions.generalized.sgn by method .sign()`
`832dad7`	`pkgs/sagemath-standard-no-symbolics/MANIFEST.in.m4: Exclude sage/lfunctions, sage/libs/giac.p*`

Answer 35 · 2021-10-19T05:23:07.000Z

Changed commit from 0a90634 to 832dad7

Answer 36 · 2021-10-19T06:18:49.000Z

Changed commit from 832dad7 to d5e24d5

Answer 37 · 2021-10-19T06:18:49.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`6b0fbda`	`For isinstance tests, import Expression from sage.structure.element`
`d5e24d5`	`src/bin/sage-eval: Do not fail if sage.calculus.predefined is not available`

Answer 38 · 2021-10-19T06:19:28.000Z

Description changed:

--- 
+++ 
@@ -16,6 +16,7 @@
 - #32717: Remove use of `sage.functions.other.sqrt` (outside of `sage.symbolic`, `sage.functions`, `sage.manifolds`)
 - #25827: Methods `__round__`, `__trunc__`, `__floor__`, `__ceil__`
 - #32718: Remove module-level imports from `sage.symbolic` etc. (outside of `sage.symbolic`, `sage.calculus` etc.)
+- #32721: Remove abuse of predefined `x` in doctests
 
 To test:

Answer 39 · 2021-10-19T06:42:55.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619, #32635 to #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619, #32635, #32614

Answer 40 · 2021-10-19T06:43:10.000Z

Changed commit from d5e24d5 to a97497a

Answer 41 · 2021-10-19T06:43:10.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`1ec0c48`	`src/sage/features/sagemath.py: Add sage.rings.number_field`
`0063749`	`src/sage/features/sagemath.py: Add features for modules that were optional extensions`
`14fd1e5`	`src/doc/en/developer/coding_basics.rst: Update discussion of feature tags`
`27c53ac`	`src/sage/features/sagemath.py: Add 'sage.plot'`
`180e31d`	`Merge #30887`
`10e8d63`	`sage.features.sagemath: Use JoinFeature when tag is different from the actually tested module`
`654d09c`	`sage.features.sagemath: Change sage_optional_tags to sage_features`
`f63a7d0`	`src/sage/features/: Move features depending on optional packages to separate files`
`4558791`	`Merge tag '9.5.beta3' into t/32614/features_and_optional_tags_for_sage_subset_distributions`
`a97497a`	`Merge #32614`

Answer 42 · 2021-10-19T16:48:49.000Z

Description changed:

--- 
+++ 
@@ -17,6 +17,7 @@
 - #25827: Methods `__round__`, `__trunc__`, `__floor__`, `__ceil__`
 - #32718: Remove module-level imports from `sage.symbolic` etc. (outside of `sage.symbolic`, `sage.calculus` etc.)
 - #32721: Remove abuse of predefined `x` in doctests
+- #32724: Replace `... is SR` by `isinstance(..., sage.rings.abc.SymbolicRing)` to handle symbolic subrings
 
 To test:

Answer 43 · 2021-10-19T16:50:04.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`46a05b3`	`src/sage/rings/polynomial/polynomial_element.pyx: Use isinstance(..., sage.rings.abc.SymbolicRing) instead of ... is SR`

Answer 44 · 2021-10-19T16:50:04.000Z

Changed commit from a97497a to 46a05b3

Answer 45 · 2021-10-19T17:10:41.000Z

Branch pushed to git repo; I updated commit sha1. This was a forced push. New commits:

`c294939`	`src/sage/rings/polynomial/polynomial_element.pyx: Use isinstance(..., sage.rings.abc.SymbolicRing) instead of ... is SR`

Answer 46 · 2021-10-19T17:10:41.000Z

Changed commit from 46a05b3 to c294939

Answer 47 · 2021-10-19T17:30:16.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`ecfcfde`	`src/sage/plot: Import Expression from sage.structure.element`

Answer 48 · 2021-10-19T17:30:16.000Z

Changed commit from c294939 to ecfcfde

Answer 49 · 2021-10-19T18:46:03.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`deece17`	`src/sage/plot/graphics.py: Use isinstance(tick_formatter, sage.rings.abc.Expression) instead of ... in SR`

Answer 50 · 2021-10-19T18:46:03.000Z

Changed commit from ecfcfde to deece17

Answer 51 · 2021-10-19T18:48:49.000Z

comment:36

$ pkgs/sagemath-standard-no-symbolics/.tox/py39-sagewheels-nopypi/bin/sage -tp 4 src/sage/graphs/
sage -t --random-seed=0 src/sage/graphs/generic_graph.py  # 89 doctests failed
sage -t --random-seed=0 src/sage/graphs/graph.py  # Killed due to segmentation fault
sage -t --random-seed=0 src/sage/graphs/generators/distance_regular.pyx  # 32 doctests failed
sage -t --random-seed=0 src/sage/graphs/generators/smallgraphs.py  # 18 doctests failed
sage -t --random-seed=0 src/sage/graphs/generators/families.py  # 12 doctests failed
sage -t --random-seed=0 src/sage/graphs/graph_generators.py  # 5 doctests failed
sage -t --random-seed=0 src/sage/graphs/bipartite_graph.py  # 3 doctests failed
sage -t --random-seed=0 src/sage/graphs/tutte_polynomial.py  # 4 doctests failed
sage -t --random-seed=0 src/sage/graphs/generators/random.py  # 2 doctests failed
sage -t --random-seed=0 src/sage/graphs/generators/basic.py  # 4 doctests failed
sage -t --random-seed=0 src/sage/graphs/graph_latex.py  # 5 doctests failed
sage -t --random-seed=0 src/sage/graphs/graph_plot.py  # 30 doctests failed
sage -t --random-seed=0 src/sage/graphs/spanning_tree.pyx  # 2 doctests failed
sage -t --random-seed=0 src/sage/graphs/hypergraph_generators.py  # 2 doctests failed
sage -t --random-seed=0 src/sage/graphs/graph_decompositions/tree_decomposition.pyx  # 15 doctests failed
sage -t --random-seed=0 src/sage/graphs/matchpoly.pyx  # 2 doctests failed
sage -t --random-seed=0 src/sage/graphs/hyperbolicity.pyx  # 52 doctests failed
sage -t --random-seed=0 src/sage/graphs/traversals.pyx  # 7 doctests failed
sage -t --random-seed=0 src/sage/graphs/generic_graph_pyx.pyx  # 1 doctest failed

Answer 52 · 2021-10-20T00:21:42.000Z

Changed commit from deece17 to fc17053

Answer 53 · 2021-10-20T00:21:42.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`fc17053`	`Merge tag '9.5.beta4' into t/32601/modularization_of_sagelib__break_out_a_separate_package_sagemath_standard_no_symbolics`

Answer 54 · 2021-10-20T07:00:27.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`51b554f`	`sage.misc.functional: Move sqrt here from sage.functions.other`
`71165ea`	`git grep -l 'functions.import.sqrt' \| xargs sed -i.bak 's/from sage[.]functions[.].* import sqrt *$/from sage.misc.functional import sqrt/'`
`1214541`	`git grep -l 'functions.import.sqrt' \| xargs sed -i.bak 's/from sage[.]functions[.].* import _do_sqrt *$/from sage.misc.functional import _do_sqrt/'`
`4a752e0`	`git grep -l 'functions.import.sqrt' \| xargs sed -E -i.bak $'s/^( )from (sage[.]functions[.]. import .)(, sqrt\|sqrt, )(.)/\1from \2\4\\n\1from sage.misc.functional import sqrt/'`
`5952b37`	`src/sage/misc/all.py: Add sqrt`
`905e800`	`src/sage/misc/functional.py: Fix imports`
`451ac27`	`src/sage/functions/other.py: Remove import from sage.rings.all`
`d04c7e4`	`Merge #32717`
`4ae0cb2`	`src/sage/dynamics/arithmetic_dynamics/projective_ds.py: lazy_import from sage.calculus`
`8d68649`	`src/sage/dynamics/arithmetic_dynamics/endPN_automorphism_group.py: Use integer division instead of floor(.../...)`

Answer 55 · 2021-10-20T07:00:27.000Z

Changed commit from fc17053 to 8d68649

Answer 56 · 2021-10-21T01:36:56.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619, #32635, #32614 to #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619, #32635, #32614, #32717

Answer 57 · 2021-10-29T07:52:23.000Z

Changed commit from 8d68649 to 98916c6

Answer 58 · 2021-10-29T07:52:23.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`cebcda3`	`Merge tag '9.5.beta4' into t/29039/pip_installable_package_sage_bootstrap`
`0026892`	`Merge tag '9.5.beta5' into t/29039/pip_installable_package_sage_bootstrap`
`e068bd9`	`Merge #29039`
`98916c6`	`Merge branch 't/29865/t/29865-modularizarion-sage-objects' into t/32601/modularization_of_sagelib__break_out_a_separate_package_sagemath_standard_no_symbolics`

Answer 59 · 2021-10-29T17:30:44.000Z

comment:41

$ pkgs/sagemath-standard-no-symbolics/.tox/py39-sagewheels-nopypi/bin/sage -tp 4 src/sage/graphs/
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generic_graph.py  # 46 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/graph.py  # Killed due to segmentation fault
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generators/distance_regular.pyx  # 32 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generators/smallgraphs.py  # 18 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generators/families.py  # 12 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generators/random.py  # 1 doctest failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/bipartite_graph.py  # 3 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/graph_generators.py  # 1 doctest failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/tutte_polynomial.py  # 2 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generators/basic.py  # 4 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/graph_latex.py  # 5 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/hypergraph_generators.py  # 2 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/graph_decompositions/tree_decomposition.pyx  # 15 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/matchpoly.pyx  # 2 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/hyperbolicity.pyx  # 52 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/traversals.pyx  # 7 doctests failed
sage -t --random-seed=221465068303176183606154232015486911187 src/sage/graphs/generic_graph_pyx.pyx  # 1 doctest failed

Answer 60 · 2021-10-29T17:42:16.000Z

Changed dependencies from #32575, #32442, #29865, #32599, #32593, #32608, #32708, #32712, #32665, #32619, #32635, #32614, #32717 to #29865, #32731

Answer 61 · 2021-10-29T19:20:32.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`00f5615`	`src/sage/graphs/hyperbolicity.pyx: Remove unused import`
`27b44b9`	`src/sage/modular/pollack_stevens/dist.pyx: Remove unused import`
`7f1d021`	`src/sage/quadratic_forms/ternary.pyx: Remove unused import`
`d5cfe2a`	`src/sage/combinat/crystals/tensor_product_element.pyx: Remove unused import`
`d825aa8`	`src/sage/combinat/crystals/littelmann_path.py: Use integer_floor instead of sage.functions.other.floor`
`9c35213`	`src/sage/combinat/diagram_algebras.py: Use integer_floor, integer_ceil instead of importing from sage.functions`
`57551d3`	`src/sage/graphs/generic_graph.py: Use integer_floor instead of sage.functions.other.floor`
`bed7308`	`src/sage/geometry/polyhedron/base.py: Remove stray character`
`33a2e7b`	`src/sage/geometry/polyhedron/base.py: Fix up imports`
`543d5bf`	`Merge branch 'u/mkoeppe/avoid_ceil__floor_from_sage_functions_other_in_non_symbolic_uses' of git://trac.sagemath.org/sage into t/32601/modularization_of_sagelib__break_out_a_separate_package_sagemath_standard_no_symbolics`

Answer 62 · 2021-10-29T19:20:32.000Z

Changed commit from 98916c6 to 543d5bf

Answer 63 · 2021-10-29T21:34:31.000Z

Description changed:

--- 
+++ 
@@ -14,6 +14,9 @@
 - #32708: `sage.tensor.modules`: remove dependency on `sage.manifolds`
 - #32712 `sage.tensor.modules`: make doctests involving `SR` optional
 - #32717: Remove use of `sage.functions.other.sqrt` (outside of `sage.symbolic`, `sage.functions`, `sage.manifolds`)
+- #32731: Avoid `ceil`, `floor` from `sage.functions.other` in non-symbolic uses
+- #32794: `sage.functions.log.log`: Move to `sage.misc.functional`
+
 - #25827: Methods `__round__`, `__trunc__`, `__floor__`, `__ceil__`
 - #32718: Remove module-level imports from `sage.symbolic` etc. (outside of `sage.symbolic`, `sage.calculus` etc.)
 - #32721: Remove abuse of predefined `x` in doctests

Answer 64 · 2021-10-29T21:34:31.000Z

Changed dependencies from #29865, #32731 to #29865, #32731, #32794

Answer 65 · 2021-10-29T21:52:38.000Z

comment:45

sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generic_graph.py  # 15 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/graph.py  # Killed due to segmentation fault
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generators/distance_regular.pyx  # 7 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generators/smallgraphs.py  # 18 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generators/families.py  # 12 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generators/random.py  # 1 doctest failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/tutte_polynomial.py  # 2 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/graph_generators.py  # 1 doctest failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/bipartite_graph.py  # 3 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generic_graph_pyx.pyx  # 1 doctest failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/graph_latex.py  # 5 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/generators/basic.py  # 4 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/graph_decompositions/tree_decomposition.pyx  # 15 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/hypergraph_generators.py  # 2 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/matchpoly.pyx  # 2 doctests failed
sage -t --random-seed=49515356934901712207815916771738328605 src/sage/graphs/traversals.pyx  # 7 doctests failed

Answer 66 · 2021-10-29T23:33:59.000Z

Changed commit from 543d5bf to 7373f4f

Answer 67 · 2021-10-29T23:33:59.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`6be920a`	`src/sage/combinat/words/finite_word.py: Change import of log for symbolic use to import from sage.functions.log`
`238e97e`	`src/sage/matrix/operation_table.py: Change non-symbolic use of log to import from sage.misc.functional`
`94a81a9`	`Merge #32794`
`42fc62b`	`src/sage/groups/lie_gps/nilpotent_lie_group.py: Make another import from sage.manifolds lazy`
`7d12d1f`	`src/sage/graphs/hypergraph_generators.py: Import binomial from sage.arith.misc`
`5fe8aa6`	`src/sage/geometry/polyhedron/combinatorial_polyhedron/base.pyx: Avoid imports from .all`
`6d5ec0a`	`git grep -l 'all import cached' src/sage \| xargs sed -E -i.bak $'s/^( )from sage.all import (cached_[a-z]) $/\1from sage.misc.cachefunc import \2/'`
`299bd0c`	`git grep -l 'all import .Integer' src/sage \| xargs sed -E -i.bak $'s/^( )from sage.all import Integer $/\1from sage.rings.integer import Integer/'`
`54fa2ee`	`git grep -l 'all import .GF' src/sage \| xargs sed -E -i.bak $'s/^( )from sage.all import GF $/\1from sage.rings.finite_rings.finite_field_constructor import GF/'`
`7373f4f`	`Merge #32733`

Answer 68 · 2021-10-29T23:34:24.000Z

Changed dependencies from #29865, #32731, #32794 to #29865, #32731, #32733, #32794

Answer 69 · 2021-10-29T23:58:24.000Z

comment:48

sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generic_graph.py  # 15 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/graph.py  # Bad exit: 1
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generators/distance_regular.pyx  # 7 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generators/smallgraphs.py  # 18 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generators/families.py  # 12 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generators/random.py  # 1 doctest failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/graph_generators.py  # 1 doctest failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/tutte_polynomial.py  # 2 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/bipartite_graph.py  # 3 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generators/basic.py  # 4 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/graph_latex.py  # 5 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/graph_decompositions/tree_decomposition.pyx  # 15 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/matchpoly.pyx  # 2 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/traversals.pyx  # 7 doctests failed
sage -t --random-seed=150700228486336030108077186454218443399 src/sage/graphs/generic_graph_pyx.pyx  # 1 doctest failed

Answer 70 · 2021-11-01T07:14:59.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`3c821bd`	`sage.functions.other._eval_floor_ceil: Handle elements of symbolic subrings like elements of SR`
`f1c9258`	`src/sage/combinat/q_analogues.py: Handle symbolic subrings like SR`
`f98855b`	`src/sage/dynamics/arithmetic_dynamics/projective_ds.py: Use sage.rings.abc.SymbolicRing instead of 'is SR'`
`7f1500e`	`src/sage/geometry/polyhedron/parent.py: For backend='normaliz', accept subrings of SR`
`76e0962`	`[Diff]ScalarFieldAlgebra._coerce_map_from_: Also coerce from subrings of SR`
`b7470d1`	`Matrix.is_{positive_operator,cross_positive,lyapunov_like}_on: Handle symbolic subrings like SR`
`5fca7fc`	`continued_fraction: Handle symbolic subrings like SR`
`038eb9f`	`src/sage/symbolic/pynac_impl.pxi (py_is_integer, py_is_exact): Handle symbolic subrings like SR`
`ff83c4c`	`sage.repl.ipython_kernel (widget_from_tuple, slider): Handle symbolic subrings like SR`
`1c4c53c`	`Merge branch 'u/mkoeppe/replace______is_sr__by_isinstance______sage_rings_abc_symbolicring__to_handle_symbolic_subrings' of git://trac.sagemath.org/sage into t/32601/modularization_of_sagelib__break_out_a_separate_package_sagemath_standard_no_symbolics`

Answer 71 · 2021-11-01T07:14:59.000Z

Changed commit from 7373f4f to 1c4c53c

Answer 72 · 2021-11-14T06:01:58.000Z

Changed commit from 1c4c53c to 41a5f50

Answer 73 · 2021-11-14T06:01:58.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`2788e3f`	`Merge #32769`
`6187f93`	`Merge tag '9.5.beta6' into t/29865/t/29865-modularizarion-sage-objects`
`a6cc585`	`build/pkgs/sage_setup/install-requires.txt: Fix version`
`743e004`	`pkgs/sagemath-objects/MANIFEST.in: Add sage.misc.namespace_package`
`41a5f50`	`Merge #29865`

Answer 74 · 2021-11-14T06:48:56.000Z

Changed commit from 41a5f50 to d805d10

Answer 75 · 2021-11-14T06:48:56.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`f9182b4`	`Merge tag '9.5.beta5' into t/32733/remove_more__all_imports`
`2ce2751`	`src/sage/interacts/library.py: Remove unused imports`
`23d8441`	`src/sage/interacts/library.py: suppress pyflakes warning`
`48360b7`	`src/sage/libs/eclib/interface.py: Remove unused import`
`e2d1765`	`Merge tag '9.5.beta6' into t/32733/remove_more__all_imports`
`d805d10`	`Merge #32733`

Answer 76 · 2021-11-14T06:49:17.000Z

comment:52

Cyclic import problem:

>>> import sage.categories.all
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/Users/mkoeppe/s/sage/sage-rebasing/worktree-gcc11/pkgs/sagemath-standard-no-symbolics/.tox/py39-sagewheels-nopypi/lib/python3.9/site-packages/sage/categories/all.py", line 36, in <module>
    from .basic import *
  File "/Users/mkoeppe/s/sage/sage-rebasing/worktree-gcc11/pkgs/sagemath-standard-no-symbolics/.tox/py39-sagewheels-nopypi/lib/python3.9/site-packages/sage/categories/basic.py", line 44, in <module>
    from .complete_discrete_valuation import CompleteDiscreteValuationRings
ImportError: cannot import name 'CompleteDiscreteValuationRings' from 'sage.categories.complete_discrete_valuation' (/Users/mkoeppe/s/sage/sage-rebasing/worktree-gcc11/pkgs/sagemath-standard-no-symbolics/.tox/py39-sagewheels-nopypi/lib/python3.9/site-packages/sage/categories/complete_discrete_valuation.py)

Answer 77 · 2021-11-20T19:00:43.000Z

Changed commit from d805d10 to 531063a

Answer 78 · 2021-11-20T19:00:43.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`48cab99`	`Import Algebra from sage.rings.ring, not sage.algebras.algebra`
`9f5fd79`	`Import CommutativeAlgebra from sage.rings.ring, not sage.rings.commutative_algebra`
`e606d35`	`src/sage/rings/polynomial/polynomial_ring.py: fixup`
`0374024`	`Merge #32870`
`2a4a323`	`Merge tag '9.5.beta7' into t/29039/pip_installable_package_sage_bootstrap`
`30da94c`	`Merge #29039`
`a72ee3b`	`src/sage/all__sagemath_objects.py: Add some more imports`
`f3ee49b`	`src/sage/all__sagemath_objects.py: Add definitions of Integer, RealNumber for doctesting`
`9ef0567`	`Merge #29039`
`531063a`	`Merge #29865`

Answer 79 · 2021-11-20T19:19:41.000Z

Changed dependencies from #29865, #32731, #32733, #32794 to #29865, #32731, #32733, #32794, #32913

Answer 80 · 2021-11-20T19:39:19.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`2cc0497`	`build/pkgs/{sage_conf,sage_setup}/install: Do not use sdh_pip_editable_install`
`b1b5a09`	`Merge #32913`

Answer 81 · 2021-11-20T19:39:19.000Z

Changed commit from 531063a to b1b5a09

Answer 82 · 2021-11-20T19:41:00.000Z

comment:56

Replying to @mkoeppe:

Cyclic import problem

... has disappeared

Answer 83 · 2021-11-20T19:41:18.000Z

comment:57

$ pkgs/sagemath-standard-no-symbolics/.tox/py39-sagewheels-nopypi/bin/sage-runtests -p 4 src/sage/graphs/
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generic_graph.py  # 19 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/graph.py  # Bad exit: 1
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generators/distance_regular.pyx  # 7 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generators/smallgraphs.py  # 18 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/connectivity.pyx  # 2 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/graph_decompositions/fast_digraph.pyx  # 5 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generators/families.py  # 12 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generators/random.py  # 1 doctest failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/graph_generators.py  # 1 doctest failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/tutte_polynomial.py  # 2 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generators/basic.py  # 4 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/matchpoly.pyx  # 2 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/generic_graph_pyx.pyx  # 1 doctest failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/bipartite_graph.py  # 3 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/graph_latex.py  # 5 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/graph_decompositions/tree_decomposition.pyx  # 15 doctests failed
sage -t --random-seed=334966994128161535997678980273883901472 src/sage/graphs/traversals.pyx  # 7 doctests failed

Answer 84 · 2021-11-20T20:14:21.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`98fa12a`	`sage.graphs.generators.random.RandomChordalGraph: Use sage.misc.functional.isqrt`
`d4aeaee`	`sage.graphs.graph_decompositions.tree_decomposition.treelength_lowerbound: Avoid ceil from sage.functions, remove workaround for python 2 integer div`
`d2cdbf2`	`src/sage/graphs/graph_latex.py: Mark doctests # optional - sage.symbolic`

Answer 85 · 2021-11-20T20:14:21.000Z

Changed commit from b1b5a09 to d2cdbf2

Answer 86 · 2021-11-20T20:34:44.000Z

Changed commit from d2cdbf2 to 0781d78

Answer 87 · 2021-11-20T20:34:44.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`0781d78`	`src/sage/groups/lie_gps/catalog.py: Use lazy_import`

Answer 88 · 2021-11-20T22:06:09.000Z

Changed dependencies from #29865, #32731, #32733, #32794, #32913 to #29865, #32731, #32733, #32794, #32913, #32888, #32916

Answer 89 · 2021-11-20T22:06:19.000Z

Changed commit from 0781d78 to e45c0a2

Answer 90 · 2021-11-20T22:06:19.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`df49677`	`src/sage/graphs/graph_latex.py: Mark doctests # optional - sage.symbolic`
`8d7b7cd`	`src/sage/graphs/generic_graph_pyx.pyx: In doctest, use math.pi with polar_plot`
`d062a72`	`src/sage/graphs/matchpoly.pyx: Mark a doctest # optional - sage.symbolic`
`db13d3f`	`src/sage/graphs/bipartite_graph.py: Mark some doctests # optional - sage.symbolic`
`bab8600`	`src/sage/graphs/generators/families.py: Avoid using sage.functions.trig`
`7b7b4cd`	`src/sage/graphs/graph.py: In doctests, use integer_ceil instead of ceil`
`d2ada01`	`GenericGraph.laplacian_matrix: Import sqrt only when needed, add # optional - sage.symbolic`
`a6a3d4c`	`src/sage/graphs/generators/distance_regular.pyx: Avoid use of sage.functions.trig`
`9fa5543`	`src/sage/graphs/generic_graph.py: Replace use of symbolic callable expression in doctest by lambda`
`e45c0a2`	`Merge #32916`

Answer 91 · 2021-11-21T00:55:29.000Z

Changed commit from e45c0a2 to 9740dc7

Answer 92 · 2021-11-21T00:55:29.000Z

Branch pushed to git repo; I updated commit sha1. New commits:

`eb0552d`	`src/sage/graphs/generators/basic.py: In doctest, remove unnecessary use of SR`
`b38bdf5`	`src/sage/graphs/generators/smallgraphs.py: In doctest, remove unnecessary use of SR`
`2d1bb74`	`src/sage/libs/symmetrica/symmetrica.pxi: Remove .all imports`
`53e5995`	`src/sage/graphs/graph.py: In doctest, use integer_floor instead of floor`
`5bed573`	`src/sage/graphs: Mark some doctests # optional - sage.symbolic`
`9740dc7`	`src/sage/graphs/generators/families.py: Replace use of floor by //`

Answer 93 · 2021-11-26T22:55:31.000Z

Changed commit from 9740dc7 to a83ec5d

Answer 94 · 2021-11-26T22:55:31.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`cf61104`	`Merge branch 'develop' of git://github.com/sagemath/sage into public/refactoring/complexCycle`
`381dc67`	`Add pxd file`
`1d0d20d`	`Try global cimport`
`dfa1de0`	`Use sage.rings.abc.ComplexIntervalField instead of soon-deprecated class`
`3f2d873`	`Merge branch 'develop' of git://github.com/sagemath/sage into public/refactoring/complexCycle`
`acf57b5`	`Fix typo`
`fb09fda`	`Fix up imports`
`55da358`	`Merge branch 'develop' of https://github.com/sagemath/sage into public/refactoring/complexCycle`
`401fee5`	`Remove cycle around complex_double`
`a83ec5d`	`Merge #30741`

Answer 95 · 2021-12-12T23:10:12.000Z

Changed commit from a83ec5d to c314e78

Answer 96 · 2021-12-12T23:10:12.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`e7f538d`	`sage.features.bliss: Change name of BlissLibrary feature to libbliss, remove it from all_features`
`12a2507`	`src/sage/features/interfaces.py: Fix indentation in docstring`
`0dd76b6`	`Merge tag '9.5.beta7' into t/32174/doctests__detect__safe__external_features_even_if____optional_external__is_not_used`
`07b2512`	`src/sage/misc/latex.py: Conditionalize some doctests on latex_package_tkz_graph`
`cb13437`	`32174: fix the --show-skipped doctest report`
`391dca1`	`sage.misc.latex.png: Mark doctest # optional - imagemagick`
`6f311b3`	`src/sage/doctest/external.py: Revert latex features to 'external'`
`3bfe1a1`	`32174: adapting the doctest listing external softwares`
`fdfe1a7`	`src/sage/tests/cmdline.py: Mark a doctest # known bug #32697`
`c314e78`	`Merge branch 'public/32174' of git://trac.sagemath.org/sage into t/32601/modularization_of_sagelib__break_out_a_separate_package_sagemath_standard_no_symbolics`

Answer 97 · 2022-01-19T04:03:17.000Z

Changed dependencies from #29865, #32731, #32733, #32794, #32913, #32888, #32916 to #29865, #32913, #32888, #33199

Answer 98 · 2022-01-19T04:06:17.000Z

Changed dependencies from #29865, #32913, #32888, #33199 to #29865, #32913, #32888, #33199, #33146

Answer 99 · 2022-01-19T04:07:01.000Z

Changed commit from c314e78 to 0a3f6f1

Answer 100 · 2022-01-19T04:07:01.000Z

Branch pushed to git repo; I updated commit sha1. Last 10 new commits:

`84a887e`	`Merge #32999`
`0694b04`	`git grep -l 'graphs.all.import' \| xargs sed -E -i.bak $'s/^( )from sage.all import Graph, DiGraph $/\1from sage.graphs.graph import Graph\n\1from sage.graphs.digraph import Digraph/;s/from sage.all import Graph/from sage.graphs.graph import Graph/;s/from sage.all import DiGraph/from sage.graphs.digraph import DiGraph/;'`
`5ec356b`	`git grep -l 'graphs.all.*import' \| xargs sed -E -i.bak 's/from sage.graphs.all import graphs/from sage.graphs.graph_generators import graphs/'`
`cfb1086`	`src/sage/matroids/utilities.py: Replace imports from sage.graphs.all, sage.rings.all`
`f12c46f`	`src/sage/sandpiles/sandpile.py: Fix up imports`
`1dbef4d`	`git grep -l 'import Digraph' \| xargs sed -i.bak 's/import Digraph/import DiGraph/'`
`c51ad29`	`Merge #33199`
`9b329d5`	`some more specific imports in combinat`
`750af3d`	`modified imports of NN in combinat`
`0a3f6f1`	`Merge #33146`