timbitz

timbitz's Stars

• pytorch/pytorch

  Tensors and Dynamic neural networks in Python with strong GPU acceleration

  Language:Python80.8k1.7k43.6k21.7k

• JuliaLang/julia

  The Julia Programming Language

  Language:Julia45.1k93225.1k5.4k

• FluxML/Flux.jl

  Relax! Flux is the ML library that doesn't make you tensor

  Language:Julia4.4k921.2k602

• facebookresearch/esm

  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Language:Python3k65319593

• jcjohnson/torch-rnn

  Efficient, reusable RNNs and LSTMs for torch

  Language:Lua2.5k87188511

• pluskid/Mocha.jl

  Deep Learning framework for Julia

  Language:Julia1.3k113154254

• jokergoo/ComplexHeatmap

  Make Complex Heatmaps

  Language:R1.3k331.1k220

• malmaud/TensorFlow.jl

  A Julia wrapper for TensorFlow

  Language:Julia88442245109

• BioJulia/Bio.jl

  [DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

  Language:Julia2614314465

• BioJulia/Automa.jl

  A julia code generator for regular expressions

  Language:Julia183154715

• BioJulia/BioSequences.jl

  Biological sequences for the julia language

  Language:Julia147159147

• vastgroup/vast-tools

  A toolset for profiling alternative splicing events in RNA-Seq data.

  Language:Perl771710128

• BioJulia/BioAlignments.jl

  Sequence alignment tools

  Language:Julia59173624

• BioJulia/IntervalTrees.jl

  A data structure for efficient manipulation of sets of intervals

  Language:Julia44111917

• JuliaIO/BufferedStreams.jl

  Fast composable IO streams

  Language:Julia41101720

• BioJulia/FMIndexes.jl

  FM-index for full-text search

  Language:Julia2015310

• JuliaCollections/SuffixArrays.jl

  Native Julia suffix array implementation; Derived from sais

  Language:Julia195615

• BioJulia/IndexableBitVectors.jl

  Fully indexable dictionaries - access/rank/select operations

  Language:Jupyter Notebook121617

• xiaosaiyao/epiregulon

  inference of transcription factor activity at the single cell level

  Language:R1223

• BioJulia/WaveletMatrices.jl

  The Wavelet Matrix

  Language:Julia111227

• pkimes/spliceclust

  visualization tools for exon/junction coverage

  Language:R11112

• timbitz/Isosceles

  The Isoforms from Single-Cell; Long-read Expression Suite

  Language:R11240

• signalbash/GeneStructureTools

  Language:R7233

• timbitz/Isosceles_Paper

  Language:HTML2200