Ensembl/WiggleTools

Issues

• Skipping zeros when computing statistics over regions

  #94 opened 4 months ago by IsaacDiaz026
  1

• Cannot stream standard input to apply or apply_paste

  #93 opened 5 months ago by jluquette
  5

• stddevI taking too long?

  #92 opened 8 months ago by manuelabaquero
  0

• bioconda install

  #91 opened a year ago by hanrong498
  3

• 0 vs 1-based coordinate system

  #87 opened a year ago by gevro
  12

• The compiler raised syntax errors when compiling the "bigWiggleReader.c" source

  #90 opened a year ago by sklarame
  1

• seek output duplicate rows

  #88 opened a year ago by gevro
  4

• Output data from specific region

  #86 opened a year ago by gevro
  11

• commandParser.parserFile() Isn't Resizing words Buffer Properly Leading To Seg Fault

  #84 opened a year ago by jgaupp-accuragen
  1

• wiggletools.c -lcrypto needed for compilation.

  #82 opened 2 years ago by marcovth
  4

• Cannot find libhts.so.1

  #79 opened 2 years ago by CLAIRE-cuhk
  2

• README: Instructions miss to initialize HTSlib submodules

  #80 opened 2 years ago by paulmenzel
  3

• Output overlapping region after using function 'mean'

  #78 opened 3 years ago by songxd17
  7

• Bins at ends of chromosomes

  #77 opened 3 years ago by gevro
  2

• Installation

  #76 opened 3 years ago by gevro
  1

• Add wiggletools version number to command line

  #74 opened 3 years ago by gevro
  3

• Output specific regions

  #75 opened 3 years ago by gevro
  1

• Error installing 1.2.10

  #73 opened 3 years ago by gevro
  2

• mergeApplyDirectory.py :: syntax error

  #72 opened 3 years ago by EricDeveaud
  1

• bigBed file ending not recognised

  #71 opened 3 years ago by stevenwgen
  2

• Using wiggletools overlaps processed data, but the results cannot open by IGV

  #70 opened 4 years ago by lexie-lee
  2

• BigWig.h missing from src folder, make cannot run

  #66 opened 4 years ago by lengie
  1

• wiggletools seek combines regions with multiple zero points (undesiderable)

  #68 opened 4 years ago by SimonaSecomandi
  3

• brew installation

  #69 opened 4 years ago by gevro
  1

• Conda installation not working

  #67 opened 4 years ago by gevro
  5

• bug in bin / question

  #64 opened 4 years ago by gevro
  10

• histogram not working

  #63 opened 4 years ago by gevro
  1

• gte not working and compression

  #61 opened 4 years ago by gevro
  8

• Bug in 'bin'

  #62 opened 4 years ago by gevro
  10

• Compilation issue: libBibWig.a not found

  #60 opened 4 years ago by gevro
  4

• New version is not on brew or conda

  #58 opened 4 years ago by gevro
  1

• bufferedReader.c compilation error

  #59 opened 4 years ago by gevro
  1

• gt not working properly after bin and scale

  #55 opened 4 years ago by gevro
  5

• greater than or equal

  #54 opened 4 years ago by gevro
  4

• bin not yielding all windows

  #57 opened 4 years ago by gevro
  1

• Fill in zero values

  #56 opened 4 years ago by gevro
  1

• Make errors

  #46 opened 4 years ago by hinz1
  4

• how to average bw files?

  #53 opened 4 years ago by olechnwin
  2

• ld: error: undefined symbol: rollYourOwn

  #41 opened 4 years ago by yurivict
  2

• error accesing remote bigWig

  #49 opened 5 years ago by diekhans
  7

• No chromosome with 2 numbers in the output wig

  #48 opened 5 years ago by LucoLab
  18

• Make error

  #43 opened 5 years ago by francicco
  4

• Unexpected behaviour with trim vs overlaps?

  #42 opened 5 years ago by joshuak94
  1

• Mutation rate per epigenetic state

  #30 opened 6 years ago by drmjc
  2

• error of reading .bam files with a new bamReader.c

  #28 opened 6 years ago by qqrank
  1

• unexpected output - wiggletools profile

  #27 opened 7 years ago by ChiWPak
  2

• test fails for one diff

  #25 opened 7 years ago by rohitner
  6

• failed test - diff tmp expected

  #26 opened 7 years ago by ChiWPak
  1

• profiles - sum of output values changes based on bin size

  #24 opened 7 years ago by ChiWPak
  1

• Recommendations to compute normalizations with severals samples and one input

  #23 opened 7 years ago by LucoLab
  1