HudsonAlpha/fmlrc2

Issues

• ERROR fmlrc2] Invalid record while parsing long read file: ParseError { msg: "invalid gzip header", kind: Io, position: ErrorPosition { line: 0, id: None }, format: None }

  #35 opened 5 months ago by ytt01
  2

• The fmlrc2 used with racon

  #34 opened 9 months ago by ld9866
  2

• Feature request- Number of changes made as part of output

  #33 opened a year ago by zacksaud
  4

• Shortend read length after running FMLRC2

  #32 opened a year ago by juheon
  2

• error: Found argument '79' which wasn't expected, or isn't valid in this context

  #31 opened a year ago by bsb2014
  2

• "error: Found argument '21' which wasn't expected, or isn't valid in this context" When attempting FMLRC2 in Eukaryote Mode

  #30 opened 2 years ago by jwalewski
  2

• please show an example of how to provide multiple kmers

  #28 opened 2 years ago by rjsorr
  4

• No error if '-k=21,33,41,59,79' cannot get parsed

  #15 opened 3 years ago by mmokrejs
  4

• [Question] Split => correct => re-join

  #24 opened 3 years ago by tuannguyen8390
  2

• About self-correction of ONT

  #23 opened 3 years ago by Johnsonzcode
  3

• run error

  #1 opened 4 years ago by Johnsonzcode
  16

• Question about replicates

  #21 opened 3 years ago by majdabdul
  4

• HiC --> pacbio CLR

  #19 opened 3 years ago by Johnsonzcode
  5

• How do I update FMLRC2

  #20 opened 3 years ago by cement-head
  1

• Can fmlrc2 applied to long reads transcriptome?

  #18 opened 3 years ago by gouwei1
  0

• Memory consumption

  #17 opened 3 years ago by Akazhiel
  6

• Index generation

  #16 opened 3 years ago by Akazhiel
  3

• fmlrc2: thread 'main' panicked at 'index out of bounds: the len is 0 but the index is ...

  #14 opened 3 years ago by mmokrejs
  3

• Do heterozygous variants remain in long reads after correction?

  #12 opened 3 years ago by Yutang-ETH
  10

• Correct Nanopore long reads with Pacbio HiFi reads

  #5 opened 4 years ago by Johnsonzcode
  10

• Invalid record while parsing long read file

  #11 opened 4 years ago by maepz
  2

• Any plan to include fmlrc2 in Conda?

  #9 opened 4 years ago by fanavarro
  3

• installation (dependency) issue from cargo test --release

  #8 opened 4 years ago by pdimens
  2

• About ideal short read coverage, -m -f parameters, r1 and r2 of paired-end input, 3-pass correction and Nanopore data correction

  #7 opened 4 years ago by romseg
  9

• Correct Nanopore reads

  #4 opened 4 years ago by Johnsonzcode
  1

• installation error

  #3 opened 4 years ago by pezhmansafdari
  1