eddy-tb

eddy-tb's Stars

• torvalds/linux

  Linux kernel source tree

  Language:C183k7.8k054.2k

• twitter/the-algorithm

  Source code for Twitter's Recommendation Algorithm

  Language:Scala62.5k34196512.2k

• Cyan4973/xxHash

  Extremely fast non-cryptographic hash algorithm

  Language:C9.2k175378778

• alexdobin/STAR

  RNA-seq aligner

  Language:C1.9k852.1k506

• broadinstitute/gatk

  Official code repository for GATK versions 4 and up

  Language:Java1.7k1534.6k594

• VerbalExpressions/PythonVerbalExpressions

  Python regular expressions made easy

  Language:Python1.6k7712115

• Martinsos/edlib

  Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.

  Language:C++51523181167

• kangtegong/self-learning-cs

  『혼자 공부하는 컴퓨터구조 & 운영체제』 (한빛미디어)

  Language:HTML476610779

• mummer4/mummer

  Mummer alignment tool

  Language:C++46921202108

• whatshap/whatshap

  Read-based phasing of genomic variants, also called haplotype assembly

  Language:Python3431448340

• brentp/smoove

  structural variant calling and genotyping with existing tools, but, smoothly.

  Language:Go2361123921

• ryanlayer/giggle

  Interval data structure

  Language:C226205429

• vibansal/HapCUT2

  software tools for haplotype assembly from sequence data

  Language:C208912536

• woowabros/nestjs-library-crud

  Automatically generate CRUD Rest API based on NestJS and TypeOrm

  Language:TypeScript19862838

• Illumina/ExpansionHunter

  A tool for estimating repeat sizes

  Language:C++1833011851

• brentp/peddy

  genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF

  Language:Jupyter Notebook13478139

• nhansen/SVanalyzer

  Tools for the analysis of structural variation in genomes

  Language:Perl7752014

• ryanlayer/stix

  Structural Variant Index

  Language:C708114

• mcfrith/last-genome-alignments

  502215

• fritzsedlazeck/parliament2

  Runs a combination of tools to generate structural variant calls on whole-genome sequencing data

  Language:Python463010

• Jiefei-Wang/Painless-R-compilation-and-installation-on-Ubuntu

  recipe for all dependencies of R on Ubuntu

  35118

• mquinodo/AutoMap

  Tool to find regions of homozygosity (ROHs) from sequencing data.

  Language:Shell282259

• skandlab/SMuRF

  Language:R21277

• Illumina/RepeatCatalogs

  19953

• dpuiu/MitoHPC

  Language:Shell1121712

• brentp/svtyper

  Bayesian genotyper for structural variants

  Language:Python3501

• UCSantaCruzComputationalGenomicsLab/last

  Copy of the last aligner

  3625

• brentp/longSTR

  Call STRs in long reads or assembled contigs using TRF

  Language:Python120

• brentp/svpack

  Structural variant (SV) analysis tools

  Language:Python120

• brentp/svtools

  Tools for processing and analyzing structural variants.

  Language:Python130