lbcb-sci/racon

Issues

• CMake file doesn't recognize apple-m1 chips

  #83 opened 5 months ago by ephillips42
  1

• Inquiry about usage

  #82 opened 5 months ago by AsmaaSamyMohamedMahmoud
  0

• cuda 12 build fails with missing header pinned_allocator.h

  #80 opened a year ago by rfox-mbl
  0

• error: empty overlap set!

  #79 opened a year ago by mmnascimento
  0

• Does racon_wrapper lack --no-trimming option

  #78 opened a year ago by SalvadorGJ
  0

• Polishing polished assembly -> invalid file format

  #72 opened 2 years ago by an22an
  1

• Polishing errors close to window borders

  #76 opened a year ago by fmlt
  1

• --no-trimming leads to significant drop in BUSCO scores

  #77 opened a year ago by JWDebler
  0

• Log Racon polish edits

  #69 opened 2 years ago by justdx
  4

• Use cDNA to polish exons

  #73 opened 2 years ago by SalvadorGJ
  3

• Reads extending over the edge of the contig

  #75 opened 2 years ago by diego-rt
  1

• Segmentation fault (core dumped)

  #71 opened 2 years ago by iremdnzl
  1

• Does not build with thread-pool 4

  #60 opened 2 years ago by tillea
  3

• Polishing with racon using multiple input files?

  #70 opened 2 years ago by BioLaFu
  2

• racon use large memory than that in raven

  #68 opened 3 years ago by xiekunwhy
  2

• error: unable to find subsampled sequences!

  #67 opened 3 years ago by ziczhang
  1

• Racon fails to build on 1.5.0

  #62 opened 3 years ago by schorlton
  12

• Unequal lengths in sequence

  #66 opened 3 years ago by bioramg
  3

• warning: contig XXX might be chimeric in window XX!

  #65 opened 3 years ago by Neo-xbx-00
  2

• Racon does not build against latest edlib

  #59 opened 3 years ago by tillea
  8

• Floating Point Exception on GPU

  #58 opened 3 years ago by schorlton
  2

• Can racon only fill gaps?

  #56 opened 3 years ago by zmz1988
  6

• How to obtain Contigs from cDNA Nanopore Sequencing

  #57 opened 3 years ago by jkbenotmane
  2

• racon_wrapper: Overflow and corrupting overlaps?

  #54 opened 3 years ago by EinarBaldvin
  32

• Raccon

  #55 opened 3 years ago by rajathrao2449
  1

• compilation with CUDA fails

  #52 opened 4 years ago by estolle
  1

• docker support

  #51 opened 4 years ago by huangnengCSU
  2

• SIGSEGV in test suite when using bioparser version 3.0.12, spoa version 4.0.6

  #50 opened 4 years ago by tillea
  5

• install error

  #18 opened 4 years ago by gortey
  1

• install error

  #23 opened 4 years ago by shiyi-pan
  31

• Decrease in accuracy from racon-v1.4.5 to racon-v1.4.11

  #29 opened 4 years ago by wshropshire
  2

• Why are there two `aligning overlaps` (per split/chunk)?

  #30 opened 4 years ago by SHuang-Broad
  5

• Problem while installing racon on arm platform

  #37 opened 4 years ago by X-WJ
  3

• Recommended parameters for CLR vs ONT

  #31 opened 4 years ago by SHuang-Broad
  11

• How can I pronounce Racon?

  #38 opened 4 years ago by changhan1110
  1

• Error compiling racon

  #46 opened 4 years ago by asan-emirsaleh
  3

• GPU option

  #49 opened 4 years ago by Kirk3gaard
  1

• recommendations for read correction

  #40 opened 4 years ago by dcopetti
  11

• report of the count of corrections

  #41 opened 4 years ago by splaisan
  2

• Segmentation fault (core dumped)

  #42 opened 4 years ago by zhaoxvwahaha
  7

• What will happen if draft contains stretches of Ns?

  #39 opened 4 years ago by ms-gx
  6

• Is it expected some contigs get dropped?

  #21 opened 5 years ago by SHuang-Broad
  7

• Turning on `racon_enable_cuda` tricks `make install` to install to the wrong path

  #17 opened 5 years ago by SHuang-Broad
  5

• error: unequal lengths in sequence and overlap file for sequence

  #32 opened 5 years ago by cmaggior
  6

• Metagenome polishing

  #28 opened 5 years ago by cmaggior
  2

• Feature request: is it possible to divide the work into stages with appropriate CLI

  #26 opened 5 years ago by SHuang-Broad
  15

• racon_wrapper does not take arguments for GPU mode

  #24 opened 5 years ago by SHuang-Broad
  0

• Seems GPU was not used?

  #22 opened 5 years ago by SHuang-Broad
  6

• State clearly in Readme that default output is stdout

  #19 opened 5 years ago by SHuang-Broad
  0

• is replacing read names with integers still recommended?

  #16 opened 5 years ago by evanrrees
  2