Issues
- 1
- 5
Many reads fail QC during TALON run but meet primary, coverage, and identity filters
#98 opened by callumparr - 0
The transcript numbers don't match between example_raw_talon.gtf and example_talon_abundance.tsv
#151 opened by dudududu12138 - 1
operand type error in talon_initialize_database
#123 opened by m-noonan - 0
Multithreading is not working
#150 opened by lscdanson - 2
What is the meaning of ISM None
#148 opened by kathryncrouch - 2
Strange error
#149 opened by wdg118 - 4
Issue with talon filter
#142 opened by rugilemat - 13
Problem with talon_initialize_database
#140 opened by Kiliankleemann - 3
'check_database_integrity' error
#145 opened by hdm-23 - 0
error when running talon annotator
#146 opened by wang093098 - 1
internal priming on PCS111 cDNA kit
#143 opened by MustafaElshani - 1
- 1
Question - merging TALON databases
#141 opened by kathryncrouch - 2
new release?
#133 opened by wresch - 1
Error with installation
#138 opened by Kiliankleemann - 6
- 2
Issue with "Could not retrieve index file"
#136 opened by patchthr33 - 1
TypeError: stat: path should be string, bytes, os.PathLike or integer, not NoneType
#134 opened by adbeggs - 4
Does TALON database contain the alignments ?
#135 opened by callumparr - 0
- 11
- 1
Key Error: "gene novelty"
#110 opened by asipal - 2
Multithread bam sort
#116 opened by fergsc - 2
- 4
How to run downstream differential analysis with an expanded transcriptome generated by TALON.
#109 opened by callumparr - 0
Abundance and fraction_as not showing properly
#130 opened by karlaarz - 2
What should I do if I have reads that are reverse complement to the original RNA sequences?
#128 opened by hd00ljy - 5
Allowing Genomic category
#105 opened by callumparr - 2
- 2
fail to extract CB field
#127 opened by kunxiong - 2
many novel isoforms of very short, even 1bp
#107 opened by callumparr - 10
TALON on single-cell data
#115 opened by TinyTasy - 1
- 3
Duplicate transcripts - forward and reverse.
#124 opened by fergsc - 1
- 1
Error message : ValueError: SAM transcript 463c55e7-91c0-45cf-9630-122afc9a2267 lacks an MD tag
#117 opened by thadasps - 1
How to visualize custom gtf?
#122 opened by thadasps - 1
Error: value too large to convert to int16_t
#120 opened by catsargent - 0
numpy<1.24.0 should be added as a requirement
#119 opened by catsargent - 1
I get 'Annotation name 'ADV5_annot' not found in this database' in step talon_abundance
#118 opened by thadasps - 11
Annotation name not found
#112 opened by rkyger-git - 2
Error when using non-human GTF
#113 opened by ConnorBarnhill - 2
What database to use?
#114 opened by fergsc - 8
removing sample(s) from the talon database
#104 opened by ew367 - 2
missing temporary bam files
#108 opened by yeroslaviz - 0
test failures on the development branch "argument "ascending" expected type bool, received type str."
#100 opened by detrout - 7
- 0
Wrong syntax for python type annotations
#99 opened by detrout - 2
Inconsistent mapping in multiple Talon runs
#103 opened by kwells4