olgabot/rna-seq-diff-exprn
RNA-Sequencing data differential expression analysis pipeline. Performs: genome coverage (via bedtools and HTSeq), generates Circos code and plots, differential expression (via DESeq and NOISeq), structural variant detection (e.g. fusion genes, via SVDetect) and differential exon usage (via DEXSeq).
R
Stargazers
- alexlancaster@amberbiology / @IGDORE
- AlfredShawn
- arhelion
- asntechStanford University
- audy@OneCodex
- burkesquiresNIAID BCBB
- dreamfly999
- fabiolibCambridge, UK
- fanliang123Chongqing university of Posts and Telecommunications
- gouthamatlaBarcelona
- gyd1990
- hayaken1978jp
- HouyuZhangPeking University & CIBR
- hsbi
- jeffbhasinLos Angeles
- jjdevegaEarlham
- jmw86069Integrative Bioinformatics
- joelostblomUniversity of British Columbia
- johnsolk@10xgenomics
- jowkarAGRF
- martijnvermaatAmsterdam
- mrcardholder
- mrG7Π ∩ ϟ
- olgabot@seanome
- omicsnutNew York Genome Center
- rorykBranford, CT
- shamitashettyWashington D.C.
- Sisov
- tanglingfungstartup
- th86New York
- wengkhong
- x2ylineCentral South University
- xiongxu
- yangming
- zengfengbowww.biocsi.com
- zychen2016