qibaiqi

qibaiqi's Stars

• alexdobin/STAR

  RNA-seq aligner

  Language:C1.9k842.1k508

• klmr/box

  Write reusable, composable and modular R code

  Language:R8702029447

• YuLab-SMU/ggtree

  :christmas_tree:Visualization and annotation of phylogenetic trees

  Language:R85038506173

• r-lib/styler

  Non-invasive pretty printing of R code

  Language:R7421259971

• GuangchuangYu/nCov2019

  query stats of infected coronavirus cases

  Language:R4352672164

• LKremer/ggpointdensity

  :chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

  Language:R41761826

• plotly/dashR

  Create data science and AI web apps in R

  Language:JavaScript3852615831

• r-lib/covr

  Test coverage reports for R

  Language:R33813448118

• dviraran/SingleR

  SingleR: Single-cell RNA-seq cell types Recognition (legacy version)

  Language:HTML2802015799

• YuLab-SMU/enrichplot

  Visualization of Functional Enrichment Result

  Language:R2371222266

• feddelegrand7/ralger

  ralger makes it easy to scrape a website. Built on the shoulders of titans: rvest, xml2.

  Language:R1566714

• kanaverse/kana

  Single cell analysis in the browser

  Language:JavaScript142612112

• coolbutuseless/emphatic

  Highlighting R output in the console

  Language:R1416135

• YuLab-SMU/DOSE

  :mask: Disease Ontology Semantic and Enrichment analysis

  Language:R118114936

• xiangpin/ggstar

  :star: star layer for ggplot2

  Language:R100277

• oschwengers/referenceseeker

  Rapid determination of appropriate reference genomes.

  Language:Python896255

• clindet/bget

  Portable command-line tool to query bioinformatics APIs, data, databases and files.

  Language:Go885519

• akdess/CaSpER

  Language:R7978528

• deweylab/CellO

  CellO: Gene expression-based hierarchical cell type classification using the Cell Ontology

  Language:Jupyter Notebook6562513

• noriakis/CBNplot

  Bayesian network plot for the enrichment analysis results

  Language:R6231811

• YuLab-SMU/plotbb

  :paintbrush: Grammar of Graphics for base plot

  Language:R52527

• xwtxwy/xl

  43540

• ay-lab/FitHiChIP

  Statistically Significant loops from HiChIP data

  Language:R3969620

• GuangchuangYu/gglayer

  provide extra layers for ggplot2

  Language:R37313

• mojaie/pygosemsim

  Gene ontology (GO) semantic similarity library for Python

  Language:Python20233

• bioinformatist/CrossICC

  An Interactive Consensus Clustering framework for Cross-platform data analysis

  Language:R15347

• YuLab-SMU/tidydr

  Language:R14616

• YuLab-SMU/meshes

  :stethoscope: MeSH Enrichment and Semantic analyses

  Language:R11544

• SchulzLab/OntologyEval

  OntologyEval is an approach that can be used to compare batch effect correction of normalisation methods for cell heterogeneous genome-wide datasets, like RNA-seq. It uses the cell ontology to evaluate whether datasets derived from different cell types are similar to one another.

  Language:R6401

• vjcitn/ontoProcPre314

  personal repo separate from Bioc image, but should be kept in sync

  Language:R1331