biobakery/Maaslin2

Issues

• Issue with windows system: cannot open file './Scratch/tmp_1/maaslin2.log

  #42 opened 9 months ago by AlbertSL98
  1

• Update maaslin2 bioconda recipe

  #41 opened 9 months ago by paulzierep
  1

• rCLR transformation

  #40 opened a year ago by MEladawi
  1

• a

  #39 opened a year ago by cafferychen777
  3

• Use weight in the Maaslin2

  #37 opened 2 years ago by Shawnae-Wang
  1

• "Please provide the reference for the variable" error when running Maaslin2

  #35 opened 2 years ago by polinanvkv
  1

• xtfrm.data.frame issue

  #32 opened 2 years ago by antagomir
  1

• ERROR: dependency 'lpsymphony' is not available for package 'Maaslin2'

  #29 opened 2 years ago by theo-allnutt-bioinformatics
  1

• Include version in log file?

  #28 opened 2 years ago by morganx
  1

• Add `scatter_first_n`

  #26 opened 2 years ago by liamfitzstevens
  1

• Confusion over factors of the "value" column in significant_results.tsv

  #25 opened 2 years ago by carmennns2
  2

• Install Maaslin2 in TSD

  #24 opened 2 years ago by mariamaseng
  1

• Version numbers are inconsistent between Github and Bioconductor

  #23 opened 2 years ago by harper357
  1

• Clarification for min_prevalence option

  #21 opened 2 years ago by NeginValizadegan
  3

• Edit Maaslin2 plot font sizes

  #20 opened 2 years ago by NeginValizadegan
  3

• Order changes of category variables in x-axis

  #18 opened 3 years ago by o147942
  2

• Add options to choose colour and/or shape of point in scatterplot

  #3 opened 5 years ago by FrancescoVit
  4

• NOTE: Instead of opening issues in github, please consider creating a new topic in https://forum.biobakery.org/. Please read for more details.

  #4 opened 3 years ago by sagun98
  1

• Please provide the reference for the variable 'diagnosis' which includes more than 2 levels: UC, CD, nonIBD

  #5 opened 4 years ago by uqvirg
  1

• Filtering of features by abundance

  #2 opened 5 years ago by jacodela
  1

• error while running maaslin2 in R

  #1 opened 5 years ago by NeginValizadegan
  7