bioFAM/MOFA

Issues

• No gene is appearing in plot_enrichment_detailed

  #69 opened 4 months ago by priyatamapandey
  0

• Vignette html flies not accessible

  #68 opened 6 months ago by NadjaBrun
  0

• Archive this repo

  #67 opened 7 months ago by artur-sannikov
  0

• AttributeError: module 'mofapy' has no attribute 'core.entry_point'

  #50 opened 5 years ago by dfermin
  4

• 'MOFAtools'

  #66 opened 3 years ago by yuan596
  0

• predict function should use S3 dispatching

  #65 opened 3 years ago by sthawinke
  0

• Error in py_call_impl(callable, dots$args, dots$keywords) : UnicodeEncodeError: 'ascii' codec can't encode character '\u03b5' in position 5: ordinal not in range(128)

  #64 opened 4 years ago by ClaireXinSun
  0

• Problem to use plotVarianceExplained object in ggplot2

  #63 opened 4 years ago by Chenjiani1112
  0

• Problem to use mofaOBJECT

  #62 opened 4 years ago by geraldocantelli
  2

• Different data processing on metabolomics, I get different R2.

  #60 opened 4 years ago by Chenjiani1112
  7

• Thanks. another problem on running MOFA

  #61 opened 4 years ago by Chenjiani1112
  0

• AssertionError: dimensionality mismatch

  #59 opened 4 years ago by wjddyd66
  1

• error message: mofapy package not found.

  #58 opened 4 years ago by squirrelB
  2

• Failure to Capture Common Sources of Variance in Data

  #57 opened 4 years ago by whitleyo
  1

• Error in py_call_impl(callable, dots$args, dots$keywords) : AttributeError: 'NoneType' object has no attribute 'getExpectations'

  #56 opened 4 years ago by FfKB
  1

• MOFA2: IndexError: list index out of range

  #53 opened 5 years ago by chrarnold
  1

• plotDataHeatmap() error with correlation but not with euclidean distance

  #52 opened 5 years ago by merlevede
  2

• Documentation missmatch for getDefaultModelOptions()$numFactors

  #51 opened 5 years ago by frederikziebell
  1

• Error in if (any(r[[i]] > cor_threshold)) { : missing value where TRUE/FALSE needed

  #46 opened 5 years ago by PietroD
  3

• Question on initialization

  #54 opened 5 years ago by BennyStrobes
  2

• Issue with runMOFA(object)

  #55 opened 5 years ago by vd4mmind
  1

• plotDataHeatmap() plots interpretation

  #45 opened 5 years ago by merlevede
  5

• Improving memory efficiency for CITE-seq data analysis

  #49 opened 5 years ago by LTLA
  5

• Error in py_get_attr_impl(x, name, silent) : AttributeError: module 'mofapy' has no attribute 'core.entry_point'

  #30 opened 6 years ago by ulexis99
  7

• errors in installing MOFA

  #48 opened 5 years ago by zjwzzzz
  2

• ERROR in

  #47 opened 5 years ago by huyoujinlab
  0

• How can I extract the gene sets with larger weights in the factors?

  #41 opened 5 years ago by nnlrl
  2

• Likelihood for methylation data

  #44 opened 5 years ago by merlevede
  7

• Range of total variance explained per view

  #43 opened 5 years ago by merlevede
  4

• function "plotTilesData" not included in MOFA package from BiocManager

  #40 opened 5 years ago by SBassler
  2

• Enrichment analysis with HUGO symbols

  #42 opened 5 years ago by merlevede
  2

• Error when creating object from MAE

  #39 opened 5 years ago by andreanuzzo
  3

• Failure to install with custom python

  #38 opened 5 years ago by s-andrews
  2

• Endless Removal of Factors

  #27 opened 6 years ago by whitleyo
  6

• Error in py_call_impl(callable, dots$args, dots$keywords) : SystemExit: None

  #31 opened 6 years ago by ulexis99
  2

• plotEnrichmentHeatmap doesn't pass arguments to pheatmap

  #37 opened 6 years ago by emdann
  1

• Do added Markov Blankets get passed over?

  #36 opened 6 years ago by vsomnath
  3

• Error in py_call_impl(callable, dots$args, dots$keywords): TypeError: Cannot cast ufunc add output from dtype('complex128') to dtype('float64') with casting rule 'same_kind'

  #34 opened 6 years ago by jonathanronen
  5

• Missing for loop

  #35 opened 6 years ago by vsomnath
  2

• Truncated feature names after runMOFA

  #33 opened 6 years ago by fanli-gcb
  2

• Feature request: FSEA direction of pathway/factor association

  #28 opened 6 years ago by whitleyo
  2

• ValueError in getLvIndex

  #26 opened 6 years ago by jonathanronen
  2

• Trouble Installing MOFA in R

  #29 opened 6 years ago by AmyLei96
  4

• License?

  #25 opened 6 years ago by vijay-10x
  2

• Error in py_call_impl(callable, dots$args, dots$keywords) : SystemExit: None

  #23 opened 6 years ago by brickyyyy
  5

• Error in py_call_impl(callable, dots$args, dots$keywords)

  #24 opened 6 years ago by CarlBrunius
  6

• Error in runMOFA function

  #22 opened 6 years ago by ashishjain1988
  6

• BLAS libraries use maximum number of available cores.

  #21 opened 6 years ago by sritchie73
  2

• Training and validation set

  #20 opened 6 years ago by anso-sertier
  1

• createMOFAobject() function - error with view names

  #19 opened 6 years ago by QinqinHuang
  5