Issues
- 1
statSTR handling of chrY
#207 opened by hopedisastro - 2
broken test `test_dumpSTR.py::test_BrokenVCF`
#206 opened by aryarm - 0
Converting Beagle imputed VCF for TRTools
#209 opened by maegsul - 0
mergeSTR handling large catalogs
#205 opened by hopedisastro - 1
Merge STR: More than one value found for END
#196 opened by bharathramh - 0
mergeSTR vcf limit?
#190 opened by aokulabasile - 1
feat: encode TRs in PLINK2 PGEN files
#172 opened by aryarm - 2
- 0
dumpSTR is crashed to process the male chrX
#185 opened by weizhu365 - 0
order of operations in dumpSTR
#181 opened by bioinfoYY - 2
IndexError: tuple index out of range
#157 opened by emersond368 - 0
Logistic regression in AssociaTR
#178 opened by asuresh2 - 1
- 0
- 1
create_test_files.sh output warning
#163 opened by yli091230 - 3
compareSTR compatibility with STR imputation results
#145 opened by bibb - 0
Bring back support for GangSTR require support
#167 opened by gymreklab - 2
- 2
qcSTR TypeError when analyzing multiple samples
#142 opened by MKBakker - 1
Adding BCFtools to docker file
#124 opened by ambenj - 0
Organize dockers
#139 opened by gymreklab - 2
Conflicting refs found at ****
#125 opened by AhmedArslan - 2
Feature Request: Rasterize PDFs
#77 opened by omansn - 8
MergeSTR of adVNTR Files
#130 opened by psychrb - 0
mergeSTR: support space-separated file list (which in turn allows for globs etc)?
#140 opened by davidlougheed - 1
- 0
Feature request: run statSTR only on PASSing loci
#162 opened by gymreklab - 1
- 0
compareSTR length genotype assumption
#154 opened by hopedisastro - 7
Handling of chrX data with dumpSTR
#89 opened by mikmaksi - 1
mergeSTR does not output `GRID` info
#148 opened by tanlaboratory - 4
dumpSTR index error running HipSTR VCF output
#143 opened by limrock1 - 2
- 6
reheader for mergeSTR?
#137 opened by psychrb - 3
Numpy Error with dumpSTR
#136 opened by alig99 - 1
plinkSTR issue: tool not working
#103 opened by vishalrossi - 1
Postmaster fails on space-delimited FAM files
#19 opened by gymreklab - 1
Postmaster fails on space-delimited FAM files
#18 opened by gymreklab - 4
Division by Zero in plinkSTR
#11 opened by bibb - 1
- 0
dumpSTR: Set's loci Filter to "pass" incorrectly.
#112 opened by ileenamitra - 5
Dockerfile
#107 opened by ileenamitra - 1
We need testing around ploidy
#94 opened by LiterallyUniqueLogin - 1
Multiple pairwise comparisons
#76 opened by b2jia - 3
Install help for others
#21 opened by Phillip-a-richmond - 4
Invalid syntax
#20 opened by bibb - 4
No DP or DFLANKINDEL FORMAT found
#22 opened by Phillip-a-richmond - 1
- 2
- 1
TypeError: 'map' object is not subscriptable
#24 opened by psychrb