iqbal-lab/Mykrobe-predictor
Antibiotic resistance predictions in minutes on a laptop
PythonNOASSERTION
Issues
- 3
mykrobe --version on linux shows mykrobe v0.5.6-0-gbd7923a-dirty . Is this version OK to use?
#145 opened by harrismia - 3
Index error on version 0.6.1
#154 opened by cytang19 - 1
--ont flag gives error message
#151 opened by cytang19 - 3
mykrobe predict: error: argument species:
#122 opened by hirenbioinfo - 2
mykrobe errors with: AttributeError: 'Namespace' object has no attribute 'ont'
#120 opened by antunderwood - 1
- 1
Ensuring probes do not extend too far
#111 opened by iqbal-lab - 3
- 0
- 4
Windows XP
#97 opened by milieuziektes - 2
Can we get summary for the result
#134 opened by yujun2017 - 2
Error with install on linux / python 3.6
#140 opened by RaSieb - 2
- 9
- 1
- 1
- 1
- 1
Probe generation and paralogs
#110 opened by iqbal-lab - 2
mykrobe predictor error
#125 opened by vsrinivasanoucru - 1
Json_to_tsv script in Docker
#113 opened by dankein - 2
confidence_threshold bug
#143 opened by Takadonet - 4
Failing to run Phelim/mykrobe_predictor
#147 opened by kristyhoran - 2
Coll et al lineage/sub-lineage from Mykrobe
#150 opened by flashton2003 - 1
- 8
- 1
We should document how to parallelise
#99 opened by iqbal-lab - 0
Wrapping install
#101 opened by iqbal-lab - 0
Use tmp dir instead of hardcoded /tmp/
#102 opened by Phelimb - 3
Resistance prediction for mixed isolates
#153 opened by AdmiralenOla - 4
"mccortex geno" invalid command
#130 opened by RaSieb - 4
Type Error : Write()
#148 opened by idolawoye - 4
Request: save the .json file for later use
#141 opened by RaSieb - 8
Inconsistency between Myrkrobe results and assembly
#146 opened by sachalau - 2
Question about resistance report. R vs r
#144 opened by harrismia - 0
PyPi releases do not include the license file
#142 opened by mbargull - 3
need a option for the output file
#132 opened by yujun2017 - 1
[iqbal-lab/Mykrobe-predictor] IndexError: list index out of range exception on Linux but not Mac (#126)
#131 opened by ponomarevsy - 3
Format of Variants Column
#123 opened by Owen-haha - 9
Probeset Documentation
#119 opened by RaSieb - 0
Stop printing r calls for nanopore data
#116 opened by iqbal-lab - 2
Using population genome graphs for genotyping
#112 opened by ytliuSVN - 1
paired-end reads
#106 opened by afkoeppel - 3
genotype error
#104 opened by RaSieb - 2
We could do with a new release, no?
#100 opened by iqbal-lab - 7
Problem with code_generator
#95 opened by FelipeMelis - 7
- 1
Pulling m2 into master
#103 opened by Phelimb - 5
ImportError: cannot import name unique
#91 opened by tseemann - 4
- 6
make: *** No rule to make target `src/obj/predictor/main.o', needed by `predictor'. Stop.
#94 opened by FelipeMelis