Issues
- 2
Public docker image?
#101 opened by sminot - 4
standard version scheme
#57 opened by mr-c - 1
SNAP master build error on Mac OSX
#56 opened by yakneens - 1
Paired read matcher can use enormous memory for large input with many chimeric reads
#69 opened by bolosky - 5
- 1
- 2
Read alignment duplication in output
#48 opened by cboursnell - 0
Updates to 1.0beta.18
#52 opened by snewhouse - 2
- 1
- 5
Snap takes 3 hours to align two reads
#83 opened by taltman - 5
Error- GzipDataReader: inflate failed with -2
#87 opened by MrOlm - 3
Error while creating index
#100 opened by riomario1 - 1
I got an error
#108 opened by wangzhenkeep - 2
Does not build on 32 bit architectures
#111 opened by tillea - 3
Snap aligner FASTQ record larger than buffer
#113 opened by klaas-men - 2
snap speedup above 32 threads
#116 opened by ramcn - 12
Compiling on Ubuntu 16.10 fails
#78 opened by lpryszcz - 5
- 2
snap showing high io utilization
#114 opened by ramcn - 0
Test failure on ppc64 and sparc64
#112 opened by tillea - 1
- 0
Test suite failure on ppc64 and sparc64 architectures
#110 opened by tillea - 2
- 0
- 0
Typo in Makefile for building snapxl
#89 opened by taltman - 0
- 0
- 6
The db is bigger and bigger but the aligenment time is shorter and shorter, why?
#75 opened by wangzhenkeep - 2
- 4
Documentation out of date
#84 opened by MrOlm - 2
Further development?
#77 opened by sklages - 0
- 5
Inconsistent BAM output from identical inputs
#72 opened by blahah - 2
snap index not creating GenomeIndexHash%d files
#74 opened by ericenns - 1
- 2
no match for max(unsigned long, _int64)
#68 opened by mr-c - 1
Output stats is calculated incorrectly in pair-end alignment when -F u is turned on.
#65 opened by zyxue - 1
PairedReadMatcher without -ku drops reads where both halves are unaligned in SAM/BAM input
#62 opened by bolosky - 3
- 10
Tiny fraction of reads mapped
#61 opened by blahah - 0
Invalid SM tag in sam record
#54 opened by kevyin - 0
- 2
- 1
Switch over dev branch to master
#49 opened by arahuja - 1
-so functionality is different in dev branch
#50 opened by arahuja - 4
alignments for read non-consecutive in output
#44 opened by blahah - 3
fix EventTest, single waiter
#45 opened by blahah - 4
improper parsing of FASTQ records
#46 opened by blahah - 5
Seg fault with -om 5
#42 opened by macmanes