Bioconductor/BiocFileCache

Issues

• Failure to query bfc using url containing special characters

  #52 opened 4 months ago by Shians
  1

• curl error with bfcrpath: HTTP/2 stream 1 was not closed cleanly: PROTOCOL_ERROR (err 1)

  #48 opened 7 months ago by lcolladotor
  18

• overriding rpath filename when downloading

  #51 opened 10 months ago by grlloyd
  3

• How to query and add atomically?

  #42 opened 2 years ago by romanzenka
  3

• Reducing the number of package dependencies

  #49 opened a year ago by mjsteinbaugh
  6

• Problem with remote files with whitespaces in the file name

  #47 opened 2 years ago by jorainer
  9

• stale cached file not updated when calling `bfcupdate` with `rid`

  #44 opened 2 years ago by LiNk-NY
  2

• option for not having unique identifier

  #40 opened 2 years ago by lshep
  8

• Error in removebfc in an interactive session

  #41 opened 2 years ago by sdgamboa
  1

• Cannot lock file

  #39 opened 2 years ago by ZheFrench
  2

• tools::R_user_dir vs rappdirs::user_cache_dir

  #29 opened 4 years ago by lgeistlinger
  5

• Update remote file only when changed

  #37 opened 3 years ago by chrarnold
  10

• bfcquery[['rpath']] is not the same as bfcrpath()

  #38 opened 3 years ago by LiNk-NY
  3

• set expiration date for web resource

  #36 opened 3 years ago by LiNk-NY
  2

• manual build of vignette fails

  #35 opened 3 years ago by vjcitn
  1

• bfcrpath is not thread-safe

  #33 opened 3 years ago by LTLA
  0

• cleanbfc uses wrong format strings

  #31 opened 4 years ago by LTLA
  0

• Is BiocFileCache's directory structure "scratch-safe"?

  #28 opened 4 years ago by LTLA
  2

• BiocFileCache:::.sql_db_execute(): Partial argument match of 'param' to 'params'

  #30 opened 4 years ago by HenrikBengtsson
  1

• bfcquery returns inconsistent column types for empty rows

  #26 opened 4 years ago by omsai
  2

• Wipe cache contents without destroying it

  #24 opened 5 years ago by LTLA
  2

• Deprecated dplyr functions cause check warnings

  #23 opened 5 years ago by tfkillian
  1

• tests fail due to stats URL 404ing

  #20 opened 5 years ago by mr-c
  2

• `BiocFileCache()` inducing R abort

  #18 opened 5 years ago by robertamezquita
  2

• bfcneedsupdate() fails when last_modified_time is NA

  #14 opened 6 years ago by Shians
  7

• file comparison only on Date will miss updates on edge case of same day updates

  #17 opened 6 years ago by lshep
  4

• prompt wraps poorly on macOS

  #16 opened 6 years ago by mtmorgan
  1

• example(bfcmeta) can throw error

  #15 opened 6 years ago by vjcitn
  2

• web file check

  #12 opened 6 years ago by lshep
  0

• Disable progress bar in bfcrpath

  #13 opened 6 years ago by LTLA
  3

• rpath arguments should do exact matching

  #10 opened 6 years ago by lwaldron
  2

• bfcrpath seems to dislike URLs with odd characters

  #11 opened 6 years ago by LTLA
  2

• use `file.copy` instead of `file.rename`

  #9 opened 7 years ago by LiNk-NY
  10

• Cached files should remember 'Expires' / 'Max-age' headers

  #8 opened 7 years ago by mtmorgan
  1

• Allow "pluggable" download option and update checking for remote resources

  #3 opened 7 years ago by seandavi
  4

• Default path on Windows not usable

  #6 opened 7 years ago by FelixErnst
  7

• Brainstorming: multiple cache locations handled like .libPaths()

  #4 opened 7 years ago by kevinrue
  2

• Using file hash instead of last modified time to check for cached file

  #5 opened 7 years ago by lcougnaud
  1

• Allow user-supplied rid?

  #2 opened 7 years ago by seandavi
  1

• Keep file extensions

  #1 opened 8 years ago by lshep
  1